RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 TPD52L2O43399 206 aaKnown RBP9.97□□□□□ -0.81
CLN6-223ENST00000637823 SPRY3O43610 288 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 LANCL1O43813 399 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 ORC5O43913 435 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 RHBDL1O75783 438 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 RBBP9O75884 186 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 IGHV1-46P01743 117 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 GSTT2BP0CG30 244 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 PGA5P0DJD9 388 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 HIST1H1DP16402 221 aaKnown RBP9.97□□□□□ -0.81
CLN6-223ENST00000637823 CFHR2P36980 270 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 ERVK11-1P61568 191 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 TNFAIP6P98066 277 aaPredicted RBP9.97□□□□□ -0.81
CLN6-223ENST00000637823 SSBP1Q04837 148 aaKnown RBP9.97□□□□□ -0.81
CLN6-223ENST00000637823 TAF9Q16594 264 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 PNLIPRP3Q17RR3 467 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 RGS21Q2M5E4 152 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 PIGYQ3MUY2 71 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 PLAC9Q5JTB6 97 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 LINC00596Q86U02 117 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 POC1AQ8NBT0 407 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 OR10Z1Q8NGY1 313 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 GPX8Q8TED1 209 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 TRIM63Q969Q1 353 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 SEH1LQ96EE3 360 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 MEGF10Q96KG7 1140 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 HS3ST6Q96QI5 342 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 OR2V2Q96R30 315 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 PECRQ9BY49 303 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.97□□□□□ -0.81
CLN6-223ENST00000637823 RBFOX1Q9NWB1 397 aaKnown RBP9.97□□□□□ -0.81
CLN6-223ENST00000637823 RBMX2Q9Y388 322 aaKnown RBP9.97□□□□□ -0.81
CLN6-223ENST00000637823 KLF2Q9Y5W3 355 aaPredicted RBP9.97□□□□□ -0.81
CLN6-223ENST00000637823 FASNP49327 2511 aaKnown RBP9.97□□□□□ -0.81
CLN6-223ENST00000637823 ZNF462Q96JM2 2506 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 MEIOCA2RUB1 952 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 A6NLC8 198 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 C17orf100A8MU93 164 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 H7C417 338 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 M0R233 179 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 GEMIN2O14893 280 aaKnown RBP9.96□□□□□ -0.82
CLN6-223ENST00000637823 CA11O75493 328 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 NXPH2O95156 264 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 ECDO95905 644 aaPredicted RBP9.96□□□□□ -0.82
CLN6-223ENST00000637823 LPLP06858 475 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 CD55P08174 381 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 CD3GP09693 182 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 PTHLHP12272 177 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 GNB3P16520 340 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 PRKACAP17612 351 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 FUT3P21217 361 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 GABRR1P24046 479 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 PMELP40967 661 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 GATA4P43694 442 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 ASAH1Q13510 395 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 IL13RA2Q14627 380 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 MPPED2Q15777 294 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 MPV17LQ2QL34 196 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 MST1LQ2TV78 715 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 RNASE12Q5GAN4 147 aaKnown RBP9.96□□□□□ -0.82
CLN6-223ENST00000637823 PRAMEF6Q5VXH4 476 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 ZNF57Q68EA5 555 aaPredicted RBP9.96□□□□□ -0.82
CLN6-223ENST00000637823 WDR82Q6UXN9 313 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 POC5Q8NA72 575 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 ITLN1Q8WWA0 313 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 EMG1Q92979 244 aaKnown RBP9.96□□□□□ -0.82
CLN6-223ENST00000637823 ERGIC1Q969X5 290 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 ARHGAP5-AS1Q96IT6 56 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 ZNF488Q96MN9 340 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 NEDD4LQ96PU5 975 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 NRIP2Q9BQI9 281 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 MS4A5Q9H3V2 200 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 ZMAT3Q9HA38 289 aaKnown RBP9.96□□□□□ -0.82
CLN6-223ENST00000637823 FN3KRPQ9HA64 309 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 UFSP2Q9NUQ7 469 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 PLEKHJ1Q9NW61 149 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 C1orf123Q9NWV4 160 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 RASL12Q9NYN1 266 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 MTFP1Q9UDX5 166 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 FBXO9Q9UK97 447 aaPredicted RBP9.96□□□□□ -0.82
CLN6-223ENST00000637823 FLNCQ14315 2725 aa9.96□□□□□ -0.82
CLN6-223ENST00000637823 FAM208BQ5VWN6 2430 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 IGHV3-64DA0A0J9YX35 117 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 TMEM235A6NFC5 223 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 SERPINE3A8MV23 424 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 MFNGO00587 321 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 PLA2G10O15496 165 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 GOSR1O95249 250 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 TNFRSF1AP19438 455 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 CHATP28329 748 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 GDNFP39905 211 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 AP3S2P59780 193 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 GUCA2AQ02747 115 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 SWI5Q1ZZU3 235 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 PCGF3Q3KNV8 242 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 FAM209AQ5JX71 171 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 SIGIRRQ6IA17 410 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 MZT2BQ6NZ67 158 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 FIP1L1Q6UN15 594 aaKnown RBP9.95□□□□□ -0.82
CLN6-223ENST00000637823 MEX3BQ6ZN04 569 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms