RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	TWIST2	Q8WVJ9	160 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	C1orf54	Q8WWF1	131 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	ASB13	Q8WXK3	278 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	RAD51AP1	Q96B01	352 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	ZNF707	Q96C28	371 aa	Predicted RBP	1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	SLC35E1	Q96K37	410 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	COL21A1	Q96P44	957 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	TSC22D3	Q99576	134 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	TBL1Y	Q9BQ87	522 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	KLHDC3	Q9BQ90	382 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	ANAPC13	Q9BS18	74 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	MED18	Q9BUE0	208 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	CHCHD7	Q9BUK0	85 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	LRRC61	Q9BV99	259 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	GABARAPL3	Q9BY60	117 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	POTEKP	Q9BYX7	375 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	CCDC90B	Q9GZT6	254 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	OR2AG1	Q9H205	316 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	IFI27L2	Q9H2X8	130 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	PELI2	Q9HAT8	420 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	IFT46	Q9NQC8	304 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	RRAGD	Q9NQL2	400 aa	Predicted RBP	1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	PARP11	Q9NR21	331 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	PRTFDC1	Q9NRG1	225 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	SLC7A10	Q9NS82	523 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	TAS2R7	Q9NYW3	318 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533		Q9UF83	564 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	CYB5R1	Q9UHQ9	305 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	HHLA2	Q9UM44	414 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	PROCR	Q9UNN8	238 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	PSG11	Q9UQ72	335 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	BTRC	Q9Y297	605 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	TBL2	Q9Y4P3	447 aa	Known RBP	1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	YTHDF2	Q9Y5A9	579 aa	Known RBP	1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	INSIG2	Q9Y5U4	225 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	SLC22A7	Q9Y694	548 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	DHX57	Q6P158	1386 aa	Known RBP	1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	PALLD	Q8WX93	1383 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	RIMS2	Q9UQ26	1411 aa		1.28	□□□□□ -2.2
MECP2-222	ENST00000637533	ZFYVE9	O95405	1425 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	FLT4	P35916	1363 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	IGHV3-66	A0A0C4DH42	116 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	IGHV1-69-2	A0A0G2JMI3	117 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533		A0A0J9YWU9	116 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533		A0A1B0GUV1	79 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	GRIFIN	A4D1Z8	144 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	ZNF705G	A8MUZ8	300 aa	Predicted RBP	1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	ZNF705E	A8MWA4	302 aa	Predicted RBP	1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	OR11H12	B2RN74	326 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	ERVV-1	B6SEH8	477 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533		E9PQ18	207 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533		H0YJX3	145 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533		J3QT63	122 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533		K7EQG2	157 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	LAD1	O00515	517 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	B4GALT5	O43286	388 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	FGF16	O43320	207 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	OR2A4	O95047	310 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	YIF1A	O95070	293 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	VAMP5	O95183	116 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	HAND1	O96004	215 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	MT-CO2	P00403	227 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	GP1BA	P07359	652 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	CT62	P0C5K7	136 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	RBMY1C	P0DJD4	496 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	PGA5	P0DJD9	388 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	LIPC	P11150	499 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	PTHLH	P12272	177 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	TAC1	P20366	129 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	TUBG1	P23258	451 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	GADD45A	P24522	165 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	RPL12	P30050	165 aa	Known RBP	1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	MIP	P30301	263 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	CCR7	P32248	378 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	CAPZB	P47756	277 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	GSS	P48637	474 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	MARCKSL1	P49006	195 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	GSK3B	P49841	420 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	NCBP2	P52298	156 aa	Known RBP eCLIP	1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	TAS2R46	P59540	309 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	SNAP25	P60880	206 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	CDC42	P60953	191 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	UBE2M	P61081	183 aa	Known RBP	1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	LYZ	P61626	148 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	RPS14	P62263	151 aa	Known RBP	1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	RPS23	P62266	143 aa	Known RBP	1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	LSM3	P62310	102 aa	Known RBP	1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	RAP1A	P62834	184 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	RPS21	P63220	83 aa	Known RBP	1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	PRR3	P79522	188 aa	Known RBP	1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	IL5RA	Q01344	420 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	AKR1C1	Q04828	323 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	INCA1	Q0VD86	236 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	FABP9	Q0Z7S8	132 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	BIK	Q13323	160 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	RUNX3	Q13761	415 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	C1D	Q13901	141 aa	Known RBP	1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	FCN2	Q15485	313 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	ZNF726P1	Q15940	193 aa		1.27	□□□□□ -2.21
MECP2-222	ENST00000637533	MOG	Q16653	247 aa		1.27	□□□□□ -2.21

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms