RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 CHST4Q8NCG5 386 aa13.05□□□□□ -0.32
CLN6-219ENST00000637329 OR10AD1Q8NGE0 317 aa13.05□□□□□ -0.32
CLN6-219ENST00000637329 GCDHQ92947 438 aaPredicted RBP13.05□□□□□ -0.32
CLN6-219ENST00000637329 PLPPR2Q96GM1 343 aa13.05□□□□□ -0.32
CLN6-219ENST00000637329 MRPL37Q9BZE1 423 aaKnown RBP13.05□□□□□ -0.32
CLN6-219ENST00000637329 C11orf54Q9H0W9 315 aaPredicted RBP13.05□□□□□ -0.32
CLN6-219ENST00000637329 RBFOX1Q9NWB1 397 aaKnown RBP13.05□□□□□ -0.32
CLN6-219ENST00000637329 MTCH1Q9NZJ7 389 aa13.05□□□□□ -0.32
CLN6-219ENST00000637329 DUSP13Q9UII6 198 aa13.05□□□□□ -0.32
CLN6-219ENST00000637329 POU2F3Q9UKI9 436 aa13.05□□□□□ -0.32
CLN6-219ENST00000637329 SPTBN1Q01082 2364 aaKnown RBP13.05□□□□□ -0.32
CLN6-219ENST00000637329 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.04□□□□□ -0.32
CLN6-219ENST00000637329 TMEM235A6NFC5 223 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 NAP1L6A6NFF2 107 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 WIPF3A6NGB9 483 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 SHISA9B4DS77 424 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 SOCS1O15524 211 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 SYNGR1O43759 233 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 NOS1APO75052 506 aaPredicted RBP13.04□□□□□ -0.32
CLN6-219ENST00000637329 PGA5P0DJD9 388 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 BCL3P20749 454 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 GRNP28799 593 aaKnown RBP13.04□□□□□ -0.32
CLN6-219ENST00000637329 BLVRBP30043 206 aaPredicted RBP13.04□□□□□ -0.32
CLN6-219ENST00000637329 RCVRNP35243 200 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 FAUP35544 74 aaKnown RBP13.04□□□□□ -0.32
CLN6-219ENST00000637329 PMELP40967 661 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 CBX5P45973 191 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 IL13RA2Q14627 380 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 MPV17LQ2QL34 196 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 RNASE12Q5GAN4 147 aaKnown RBP13.04□□□□□ -0.32
CLN6-219ENST00000637329 PLAC9Q5JTB6 97 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 ADAM5Q6NVV9 412 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 VHLLQ6RSH7 139 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 Q6ZNX1 250 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 LRP11Q86VZ4 500 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 DMRTC2Q8IXT2 367 aaPredicted RBP13.04□□□□□ -0.32
CLN6-219ENST00000637329 FBXL14Q8N1E6 418 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 SCCPDHQ8NBX0 429 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 SEH1LQ96EE3 360 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 DIRC2Q96SL1 478 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 SYT3Q9BQG1 590 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 ZDHHC8Q9ULC8 765 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 ST3GAL6Q9Y274 331 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 PLEKHA6Q9Y2H5 1048 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 RNF115Q9Y4L5 304 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 CACNG2Q9Y698 323 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 ATP23Q9Y6H3 246 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 CACNA1DQ01668 2161 aa13.04□□□□□ -0.32
CLN6-219ENST00000637329 MEIOCA2RUB1 952 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 ZSCAN5BA6NJL1 495 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 H0YL77 283 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 ZG16O60844 167 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 PDCD6O75340 191 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 ADH4P08319 380 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 PTHLHP12272 177 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 GABRR1P24046 479 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 CHATP28329 748 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 NPBWR2P48146 333 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 TMEM50BP56557 158 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 GNG2P59768 71 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 ERVK11-1P61568 191 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 ADIPOQQ15848 244 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 NKPD1Q17RQ9 610 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 OLFML2AQ68BL7 652 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 HIST2H2BCQ6DN03 193 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 POC1AQ8NBT0 407 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 ENKURQ8TC29 256 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 ST8SIA4Q92187 359 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 ARHGAP5-AS1Q96IT6 56 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 NRIP2Q9BQI9 281 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 PECRQ9BY49 303 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 OCEL1Q9H607 264 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 IFT22Q9H7X7 185 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 SPACA1Q9HBV2 294 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 MSL2Q9HCI7 577 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 TAAR3PQ9P1P4 343 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 ANAPC10Q9UM13 185 aa13.03□□□□□ -0.32
CLN6-219ENST00000637329 F5H5P2 479 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 GEMIN2O14893 280 aaKnown RBP13.02□□□□□ -0.33
CLN6-219ENST00000637329 OR4A8P0C604 315 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 GNB3P16520 340 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 TBPP20226 339 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 TNFSF4P23510 183 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 RFX2P48378 723 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 SRP9P49458 86 aaKnown RBP13.02□□□□□ -0.33
CLN6-219ENST00000637329 GUCA2AQ02747 115 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 MAB21L1Q13394 359 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 PCGF3Q3KNV8 242 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 PIGYQ3MUY2 71 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 FIP1L1Q6UN15 594 aaKnown RBP13.02□□□□□ -0.33
CLN6-219ENST00000637329 GDPD3Q7L5L3 318 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 TRAPPC6BQ86SZ2 158 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 FAM58AQ8N1B3 248 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 OR2Z1Q8NG97 314 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 LINC01560Q8TB33 94 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 EMG1Q92979 244 aaKnown RBP13.02□□□□□ -0.33
CLN6-219ENST00000637329 ELMOD3Q96FG2 381 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 NEDD4LQ96PU5 975 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 NPDC1Q9NQX5 325 aaPredicted RBP13.02□□□□□ -0.33
CLN6-219ENST00000637329 RCC2Q9P258 522 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms