RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 CXXC4Q9H2H0 198 aa15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 OR8G5Q8NG78 346 aa15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 COLQQ9Y215 455 aaPredicted RBP15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 FAM87AP0C7U9 286 aa15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 RNPS1Q15287 305 aaKnown RBP15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 TWIST1Q15672 202 aa15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 ANKRD55Q3KP44 614 aa15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 COL13A1Q5TAT6 717 aaPredicted RBP15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 TSPO2Q5TGU0 170 aa15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 ST8SIA1Q92185 356 aa15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 CIB3Q96Q77 187 aaPredicted RBP15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 TINAGQ9UJW2 476 aa15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 hADV38S2A0JD32 116 aa15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 PTGFRP43088 359 aa15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 YBX1P67809 324 aaKnown RBP15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 B9D1Q9UPM9 204 aa15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 E5RGE8 158 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 ZBTB37Q5TC79 503 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 NANOGP1Q8N7R0 232 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 RSG1Q9BU20 258 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 CRYBG1Q9Y4K1 1723 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 FGF2P09038 288 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 PPOXP50336 477 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 SLC16A12Q6ZSM3 486 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 GFRA3O60609 400 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 SH2D5Q6ZV89 423 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 SLC51BQ86UW2 128 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 OR1N2Q8NGR9 330 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 POMT2Q9UKY4 750 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 IGHV3-66A0A0C4DH42 116 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 HRASP01112 189 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 ADIPOQQ15848 244 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 OR1K1Q8NGR3 316 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 TMEM200CA6NKL6 621 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 TGOLN2O43493 480 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 CCL8P80075 99 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 DUX5Q96PT3 197 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 VAMP8Q9BV40 100 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 LMO7DNF2Z398 122 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 OVCH2Q7RTZ1 564 aa15.86■□□□□ 0.13
CACNA1A-227ENST00000636549 TNFSF14O43557 240 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 CD1EP15812 388 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 FABP5Q01469 135 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 PDPNQ86YL7 162 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 C19orf43Q9BQ61 176 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 PRO1933Q9H354 126 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 VDAC1P21796 283 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 PPP1CCP36873 323 aaKnown RBP15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 SRSF9Q13242 221 aaKnown RBP eCLIP15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 AQP6Q13520 282 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 MAVSQ7Z434 540 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 CACNG5Q9UF02 275 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 SPTY2D1-AS1A0A0U1RR47 76 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 A0A1W2PN81 502 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 GPR3P46089 330 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 SLC38A11Q08AI6 406 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 LHX9Q9NQ69 397 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 ACER3Q9NUN7 267 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 CROCCQ5TZA2 2017 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 TRAV38-1A0A0B4J264 116 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 TRIM77I1YAP6 450 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 NAT2P11245 290 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 EGR3Q06889 387 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 RPEL1Q2QD12 228 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 PACRGQ96M98 296 aaPredicted RBP15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 MIEN1Q9BRT3 115 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 SETD1AO15047 1707 aaKnown RBP15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 CEBPEQ15744 281 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 ZNF547Q8IVP9 402 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 ASB13Q8WXK3 278 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 MEGF10Q96KG7 1140 aa15.85■□□□□ 0.13
CACNA1A-227ENST00000636549 ZNF561Q8N587 486 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 OR13F1Q8NGS4 319 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 JAM3Q9BX67 310 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 FBLL1A6NHQ2 334 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 CACNG7P62955 275 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 BTF3P20290 206 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 PSMB6P28072 239 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 CTU2Q2VPK5 515 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 IGHV1OR15-9A0A0B4J2B8 117 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 M0R2Z0 102 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 FFAR1O14842 300 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 OR8I2Q8N0Y5 310 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 TPRX1Q8N7U7 411 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 AMER3Q8N944 861 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 POM121Q96HA1 1249 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 THYN1Q9P016 225 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 NINQ8N4C6 2090 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 CDIPTO14735 213 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 CD82P27701 267 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 GNPNAT1Q96EK6 184 aaPredicted RBP15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 NEURL2Q9BR09 285 aa15.84■□□□□ 0.13
CACNA1A-227ENST00000636549 DLL1O00548 723 aa15.83■□□□□ 0.13
CACNA1A-227ENST00000636549 C16orf82Q7Z2V1 217 aa15.83■□□□□ 0.13
CACNA1A-227ENST00000636549 ZNF502Q8TBZ5 544 aa15.83■□□□□ 0.13
CACNA1A-227ENST00000636549 MRAP2Q96G30 205 aa15.83■□□□□ 0.13
CACNA1A-227ENST00000636549 HDGFL3Q9Y3E1 203 aa15.83■□□□□ 0.13
CACNA1A-227ENST00000636549 OR5B21A6NL26 309 aa15.83■□□□□ 0.13
CACNA1A-227ENST00000636549 ANKRD33Q7Z3H0 272 aa15.83■□□□□ 0.13
CACNA1A-227ENST00000636549 ZNF429Q86V71 674 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms