RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CSNK1A1P48729 337 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 DMRTC1Q5HYR2 192 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 LANCL3Q6ZV70 420 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 OR4D5Q8NGN0 318 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 OR1L3Q8NH93 324 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 LMX1AQ8TE12 382 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 TVP23CQ96ET8 276 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 MARS2Q96GW9 593 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 NXT1Q9UKK6 140 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 PIGLQ9Y2B2 252 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 C5orf42Q9H799 3197 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 THADAQ6YHU6 1953 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 A0A1B0GV50 99 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 LOC102725191A0A1B0GVB3 256 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 A0A1B0GX78 115 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 E9PLN8 166 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 GPR37O15354 613 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 TGOLN2O43493 480 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 RND3P61587 244 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 PLPPR5Q32ZL2 321 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 SPSB3Q6PJ21 355 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 C17orf82Q86X59 251 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 FBXL14Q8N1E6 418 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 Q8WTZ3 238 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 PIGTQ969N2 578 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 SPSB1Q96BD6 273 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 NIPSNAP3BQ9BS92 247 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 IER2Q9BTL4 223 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 FAAP24Q9BTP7 215 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 SLC25A31Q9H0C2 315 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 KLRF1Q9NZS2 232 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 AK3Q9UIJ7 227 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 CYP8B1Q9UNU6 501 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 TDRD6O60522 2096 aaKnown RBP12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 SHISA8B8ZZ34 492 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 RPL36A-HNRNPH2H7BZ11 118 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 BCAT2O15382 392 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 ATP6V0CP27449 155 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 NKX6-1P78426 367 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 DLK1P80370 383 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 PHLDA2Q53GA4 152 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 HIST2H3PS2Q5TEC6 136 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 C16orf47Q6ZP98 133 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 SLC35E3Q7Z769 313 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 ZNF429Q86V71 674 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 RNF138Q8WVD3 245 aa12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 GNPNAT1Q96EK6 184 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-220ENST00000635988 B4DEV8 164 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 F5H5K5 113 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 MSR1P21757 451 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 RBP2P50120 134 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 FXYD4P59646 89 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 OR5L1Q8NGL2 311 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 OR10D4PQ8NGN7 298 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 RBMXL1Q96E39 390 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 ABHD14BQ96IU4 210 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 SPIN2AQ99865 258 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 SPIN2BQ9BPZ2 258 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 PLEKHF2Q9H8W4 249 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 IGLV3-32A0A0A0MS00 114 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 ZNF727A8MUV8 499 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 PHF1O43189 567 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 HIST1H2BKO60814 126 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 IFNA10P01566 189 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 HBE1P02100 147 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 HIST1H2BJP06899 126 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 KLK3P07288 261 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 HIST1H2BOP23527 126 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 HIST1H2BBP33778 126 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 OPRM1P35372 400 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 GLIPR1P48060 266 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 MTCP1P56278 107 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 HIST1H2BDP58876 126 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 HIST1H2BCP62807 126 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 CCL20P78556 96 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 RSU1Q15404 277 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 HIST2H2BEQ16778 126 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 ZNF506Q5JVG8 444 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 POC1BQ8TC44 478 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 HIST1H2BHQ93079 126 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 MOB3AQ96BX8 217 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 HIST1H2BNQ99877 126 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 HIST1H2BMQ99879 126 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 ZNF700Q9H0M5 742 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 HIPK2Q9H2X6 1198 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 PRDM13Q9H4Q3 707 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 ADAMTS9Q9P2N4 1935 aa12.9□□□□□ -0.34
CACNA1A-220ENST00000635988 RP1P56715 2156 aa12.89□□□□□ -0.35
CACNA1A-220ENST00000635988 MKI67P46013 3256 aaKnown RBP12.89□□□□□ -0.35
CACNA1A-220ENST00000635988 MED19A0JLT2 244 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-220ENST00000635988 C5orf63A6NC05 138 aa12.89□□□□□ -0.35
CACNA1A-220ENST00000635988 METTL12A8MUP2 240 aa12.89□□□□□ -0.35
CACNA1A-220ENST00000635988 MSTNO14793 375 aa12.89□□□□□ -0.35
CACNA1A-220ENST00000635988 CXCL1P09341 107 aa12.89□□□□□ -0.35
CACNA1A-220ENST00000635988 BTF3P20290 206 aaKnown RBP12.89□□□□□ -0.35
CACNA1A-220ENST00000635988 FKBP2P26885 142 aaKnown RBP12.89□□□□□ -0.35
CACNA1A-220ENST00000635988 RRADP55042 308 aa12.89□□□□□ -0.35
CACNA1A-220ENST00000635988 TMEM176BQ3YBM2 270 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-220ENST00000635988 TSPO2Q5TGU0 170 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms