RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 TMEM231Q9H6L2 316 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 RTTNQ86VV8 2226 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 LRRC3CA6NJW4 275 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 ZNF850A8MQ14 1090 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 H7C1Q1 480 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 H7C2Y5 167 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 HEXAP06865 529 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 B4GALT1P15291 398 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 OPRM1P35372 400 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 UCP3P55916 312 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 TMEM33P57088 247 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 PCBD1P61457 104 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 PDZK1IP1Q13113 114 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 OR8B8Q15620 311 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 CBLN2Q8IUK8 224 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 FOXRED2Q8IWF2 684 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 OR2V1Q8NHB1 315 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 OR14L1PQ8NHC6 308 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 RTN4IP1Q8WWV3 396 aaPredicted RBP11.07□□□□□ -0.64
LINC00540-203ENST00000631321 WNT2BQ93097 391 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 MARS2Q96GW9 593 aaKnown RBP11.07□□□□□ -0.64
LINC00540-203ENST00000631321 C18orf12Q96KH6 178 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 TECTBQ96PL2 329 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 FOXB1Q99853 325 aa11.07□□□□□ -0.64
LINC00540-203ENST00000631321 MRPS18CQ9Y3D5 142 aaKnown RBP11.07□□□□□ -0.64
LINC00540-203ENST00000631321 E5RGE8 158 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 RNASEK-C17orf49H0YIS7 233 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 MASP2O00187 686 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 GEMIN2O14893 280 aaKnown RBP11.06□□□□□ -0.64
LINC00540-203ENST00000631321 CXCL13O43927 109 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 MBPP02686 304 aaPredicted RBP11.06□□□□□ -0.64
LINC00540-203ENST00000631321 CFIP05156 583 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 NME2P22392 152 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 NPBWR1P48145 328 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 PPP1R32Q7Z5V6 425 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 FBXL14Q8N1E6 418 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 SPSB4Q96A44 273 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 ALKBH3Q96Q83 286 aaPredicted RBP11.06□□□□□ -0.64
LINC00540-203ENST00000631321 NSG2Q9Y328 171 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 FAM96BQ9Y3D0 163 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 FAM157AC9JC47 383 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 PDCD6O75340 191 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 FBXO24O75426 580 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 PATE4P0C8F1 98 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 F2RL1P55085 397 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 ZNF92Q03936 586 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 PIGYQ3MUY2 71 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 MYO7BQ6PIF6 2116 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 LIAT1Q6ZQX7 453 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 TOMM40LQ969M1 308 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 ZNF286AQ9HBT8 521 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 GPR35Q9HC97 309 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 SLC7A11Q9UPY5 501 aa11.06□□□□□ -0.64
LINC00540-203ENST00000631321 LSM5Q9Y4Y9 91 aaKnown RBP11.06□□□□□ -0.64
LINC00540-203ENST00000631321 OR5AC1P0C628 307 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 RFPL3SP0C7P2 107 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 PVALBP20472 110 aaPredicted RBP11.05□□□□□ -0.64
LINC00540-203ENST00000631321 RGS19P49795 217 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 Q0VFX4 171 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 CEACAM16Q2WEN9 425 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 ABCA11PQ4W5N1 156 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 TRIM61Q5EBN2 209 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 RAB11FIP2Q7L804 512 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 UBALD2Q8IYN6 164 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 OR10D3Q8NH80 312 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 FGFBP3Q8TAT2 258 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 MOB3AQ96BX8 217 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 MSI2Q96DH6 328 aaKnown RBP11.05□□□□□ -0.64
LINC00540-203ENST00000631321 ZFP57Q9NU63 452 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 KIAA1549Q9HCM3 1950 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 ZNF816-ZNF321PA0A0X1KG74 233 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 B4E171 279 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 F12P00748 615 aaPredicted RBP11.05□□□□□ -0.64
LINC00540-203ENST00000631321 MMP7P09237 267 aaPredicted RBP11.05□□□□□ -0.64
LINC00540-203ENST00000631321 TSPAN7P41732 249 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 CLDN15P56746 228 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 NRN1LQ496H8 165 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 GPR157Q5UAW9 335 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 TMEM211Q6ICI0 200 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 SLC22A25Q6T423 547 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 Q8NFD4 153 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 DYRK2Q92630 601 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 ERGIC1Q969X5 290 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 C1QTNF5Q9BXJ0 243 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 SLC2A9Q9NRM0 540 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 ST3GAL6Q9Y274 331 aa11.05□□□□□ -0.64
LINC00540-203ENST00000631321 XRCC2O43543 280 aa11.04□□□□□ -0.64
LINC00540-203ENST00000631321 GPR137BO60478 399 aa11.04□□□□□ -0.64
LINC00540-203ENST00000631321 CYTIPO60759 359 aa11.04□□□□□ -0.64
LINC00540-203ENST00000631321 SFTA3P0C7M3 94 aa11.04□□□□□ -0.64
LINC00540-203ENST00000631321 TCN2P20062 427 aa11.04□□□□□ -0.64
LINC00540-203ENST00000631321 DVL1P1P54792 670 aaPredicted RBP11.04□□□□□ -0.64
LINC00540-203ENST00000631321 PRSS12P56730 875 aa11.04□□□□□ -0.64
LINC00540-203ENST00000631321 RBM11P57052 281 aaKnown RBP11.04□□□□□ -0.64
LINC00540-203ENST00000631321 DAZAP2Q15038 168 aaPredicted RBP11.04□□□□□ -0.64
LINC00540-203ENST00000631321 SP6Q3SY56 376 aa11.04□□□□□ -0.64
LINC00540-203ENST00000631321 SKA3Q8IX90 412 aa11.04□□□□□ -0.64
LINC00540-203ENST00000631321 MAFAQ8NHW3 353 aaPredicted RBP11.04□□□□□ -0.64
LINC00540-203ENST00000631321 TMEM45BQ96B21 275 aa11.04□□□□□ -0.64
LINC00540-203ENST00000631321 RSRP1Q9BUV0 290 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms