RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 SLC25A31Q9H0C2 315 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 ZBP1Q9H171 429 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 PORCNQ9H237 461 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 CPVLQ9H3G5 476 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 C1orf198Q9H425 327 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 RNF167Q9H6Y7 350 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 SGK2Q9HBY8 427 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 INPP5EQ9NRR6 644 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 ASF1BQ9NVP2 202 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 GPATCH2LQ9NWQ4 482 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 MS4A12Q9NXJ0 267 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 SLC2A8Q9NY64 477 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 MRPL27Q9P0M9 148 aaKnown RBP2.78□□□□□ -1.96
TCF4-250ENST00000625849 VPS29Q9UBQ0 182 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 PPP1R3CQ9UQK1 317 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 RNF24Q9Y225 148 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 HDGFL3Q9Y3E1 203 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 DNAJC15Q9Y5T4 150 aa2.78□□□□□ -1.96
TCF4-250ENST00000625849 ATRXP46100 2492 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 IGHV4-4A0A075B6R2 117 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 TRAV1-2A0A0B4J238 106 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 A0A0B4J2A0 478 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 IGHV2OR16-5A0A0B4J2B6 119 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 A0A1B0GTI1 187 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 TVP23AA6NH52 213 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 A6NLC8 198 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 GABRR3A8MPY1 467 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 F5H5T6 163 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 K7EPK0 472 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 ZNF264O43296 627 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 EEF1E1O43324 174 aaKnown RBP2.77□□□□□ -1.97
TCF4-250ENST00000625849 PAGE4O60829 102 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 TNFSF13O75888 250 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 YIF1AO95070 293 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 FARS2O95363 451 aaKnown RBP2.77□□□□□ -1.97
TCF4-250ENST00000625849 OR2C1O95371 312 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 WISP3O95389 354 aaPredicted RBP2.77□□□□□ -1.97
TCF4-250ENST00000625849 CYB5R3P00387 301 aaPredicted RBP2.77□□□□□ -1.97
TCF4-250ENST00000625849 C1QCP02747 245 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 ATP1B1P05026 303 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 FCGR3AP08637 254 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 SNRPCP09234 159 aaKnown RBP2.77□□□□□ -1.97
TCF4-250ENST00000625849 CALCBP10092 127 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 ACP2P11117 423 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 CCL2P13500 99 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 FABP4P15090 132 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 KCNE1P15382 129 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 ELK1P19419 428 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 AKR1C3P42330 323 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 RPS10P46783 165 aaKnown RBP2.77□□□□□ -1.97
TCF4-250ENST00000625849 SULT1A2P50226 295 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 GZMMP51124 257 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 RAB28P51157 221 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 RND2P52198 227 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 CRISP1P54107 249 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 NDUFA6P56556 154 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 TMEM33P57088 247 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 SMIM11AP58511 58 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 YBEYP58557 167 aaPredicted RBP2.77□□□□□ -1.97
TCF4-250ENST00000625849 ERVPABLB-1P60509 514 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 UBE2MP61081 183 aaKnown RBP2.77□□□□□ -1.97
TCF4-250ENST00000625849 UBE2NP61088 152 aaKnown RBP2.77□□□□□ -1.97
TCF4-250ENST00000625849 MAXP61244 160 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 CDK3Q00526 305 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 TGM3Q08188 693 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 RBBP4Q09028 425 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 PLA2G7Q13093 441 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 TRA2AQ13595 282 aaKnown RBP eCLIP2.77□□□□□ -1.97
TCF4-250ENST00000625849 CLINT1Q14677 625 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 PTPRCAPQ14761 206 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 SNRNP35Q16560 246 aaKnown RBP2.77□□□□□ -1.97
TCF4-250ENST00000625849 PRSS8Q16651 343 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 ZSWIM7Q19AV6 140 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 PLPPR5Q32ZL2 321 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 CRY2Q49AN0 593 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 PAGE3Q5JUK9 113 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 UBE2NLQ5JXB2 153 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 TMEM69Q5SWH9 247 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 C1orf220Q5T0J3 134 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 KHDRBS2Q5VWX1 349 aaKnown RBP2.77□□□□□ -1.97
TCF4-250ENST00000625849 C12orf73Q69YU5 71 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 HIST2H2BDQ6DRA6 164 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 C22orf42Q6IC83 251 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 OR2T2Q6IF00 324 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 ZNF770Q6IQ21 691 aaPredicted RBP2.77□□□□□ -1.97
TCF4-250ENST00000625849 APOBEC3HQ6NTF7 200 aaKnown RBP2.77□□□□□ -1.97
TCF4-250ENST00000625849 STEAP1BQ6NZ63 245 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 ENPP6Q6UWR7 440 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 TEX43Q6ZNM6 134 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 DNM1P46Q6ZS02 220 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 C5orf24Q7Z6I8 188 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 SLC35E3Q7Z769 313 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 TMEM179BQ7Z7N9 219 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 NIT1Q86X76 327 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 SIAH3Q8IW03 269 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 BATF2Q8N1L9 274 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 BEST3Q8N1M1 668 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 FAM71E2Q8N5Q1 922 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 C11orf42Q8N5U0 333 aa2.77□□□□□ -1.97
TCF4-250ENST00000625849 KLHDC1Q8N7A1 406 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms