RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 FGF12P61328 243 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 LMO4P61968 165 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 HNRNPA0Q13151 305 aaKnown RBP10.42□□□□□ -0.74
LINC00963-216ENST00000623185 DGUOKQ16854 277 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 NHLRC3Q5JS37 347 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 SPIN3Q5JUX0 258 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 AWAT2Q6E213 333 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 FIP1L1Q6UN15 594 aaKnown RBP10.42□□□□□ -0.74
LINC00963-216ENST00000623185 NR2C2APQ86WQ0 139 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 CLVS1Q8IUQ0 354 aaPredicted RBP10.42□□□□□ -0.74
LINC00963-216ENST00000623185 KCNG3Q8TAE7 436 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 SEH1LQ96EE3 360 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 MED30Q96HR3 178 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 C1orf147Q96MC9 270 aaPredicted RBP10.42□□□□□ -0.74
LINC00963-216ENST00000623185 FAM192AQ9GZU8 254 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 NAA50Q9GZZ1 169 aaKnown RBP10.42□□□□□ -0.74
LINC00963-216ENST00000623185 ELL3Q9HB65 397 aaPredicted RBP10.42□□□□□ -0.74
LINC00963-216ENST00000623185 PATZ1Q9HBE1 687 aaKnown RBP10.42□□□□□ -0.74
LINC00963-216ENST00000623185 PLGRKTQ9HBL7 147 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 NDUFA13Q9P0J0 144 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 FBLN5Q9UBX5 448 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 STEAP1Q9UHE8 339 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 GLS2Q9UI32 602 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 PCDHB10Q9UN67 800 aa10.42□□□□□ -0.74
LINC00963-216ENST00000623185 PRRC2AP48634 2157 aaKnown RBP10.42□□□□□ -0.74
LINC00963-216ENST00000623185 IGKV1D-17A0A075B6S4 117 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 IGHV4-61A0A0C4DH41 118 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 A0A0G2JK05 382 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 ISPDA4D126 451 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 RFPL4AA6NLU0 287 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 RFPL4AL1F8VTS6 287 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 SH2D1BO14796 132 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 HTR3BO95264 441 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 BPNT1O95861 308 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 HEXAP06865 529 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 CHRM2P08172 466 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 ARSBP15848 533 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 AMY2BP19961 511 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 LMO1P25800 156 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 CD80P33681 288 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 OR10A3P58181 314 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 VBP1P61758 197 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 NCS1P62166 190 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 HOXA4Q00056 320 aaPredicted RBP10.41□□□□□ -0.74
LINC00963-216ENST00000623185 RAB11BQ15907 218 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 C11orf91Q3C1V1 193 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 C2orf76Q3KRA6 126 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 STUMQ69YW2 141 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 ZNF788Q6ZQV5 615 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 SLC36A1Q7Z2H8 476 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 OSR2Q8N2R0 312 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 C19orf18Q8NEA5 215 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 OR5T2Q8NGG2 359 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 CLDND2Q8NHS1 167 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 EMG1Q92979 244 aaKnown RBP10.41□□□□□ -0.74
LINC00963-216ENST00000623185 SDSLQ96GA7 329 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 GAL3ST1Q99999 423 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 MRI1Q9BV20 369 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 RBFOX1Q9NWB1 397 aaKnown RBP10.41□□□□□ -0.74
LINC00963-216ENST00000623185 CEPT1Q9Y6K0 416 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 CSMD2Q7Z408 3487 aa10.41□□□□□ -0.74
LINC00963-216ENST00000623185 CHD3Q12873 2000 aaKnown RBP10.4□□□□□ -0.74
LINC00963-216ENST00000623185 IGHV3OR15-7A0A075B7D8 119 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 CEACAM18A8MTB9 384 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 RNF223E7ERA6 249 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 H3BUI4 141 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 ZNF701M0R085 212 aaPredicted RBP10.4□□□□□ -0.74
LINC00963-216ENST00000623185 GYPAP02724 150 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 CLEC2LP0C7M8 214 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 VSIG8P0DPA2 414 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 PRKACAP17612 351 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 NPY4RP50391 375 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 SCAND1P57086 179 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 GMFBP60983 142 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 QRFPP83859 136 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 MXD1Q05195 221 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 SLC22A6Q4U2R8 563 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 USP43Q70EL4 1123 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 OR2W3Q7Z3T1 314 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 ZNF561Q8N587 486 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 PTX4Q96A99 478 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 FAM3DQ96BQ1 224 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 RAB39BQ96DA2 213 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 C1orf159Q96HA4 380 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 NKX3-1Q99801 234 aaPredicted RBP10.4□□□□□ -0.74
LINC00963-216ENST00000623185 CST11Q9H112 138 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 ZNF665Q9H7R5 613 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 ZNF222Q9UK12 451 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 POLQO75417 2590 aa10.4□□□□□ -0.74
LINC00963-216ENST00000623185 SMIM31A0A1B0GVY4 71 aa10.39□□□□□ -0.75
LINC00963-216ENST00000623185 FAM90A10PA6NDY2 464 aa10.39□□□□□ -0.75
LINC00963-216ENST00000623185 FAM90A18PA6NE21 464 aa10.39□□□□□ -0.75
LINC00963-216ENST00000623185 FAM90A16PA6NEW6 464 aa10.39□□□□□ -0.75
LINC00963-216ENST00000623185 FAM90A20PA6NIJ5 464 aa10.39□□□□□ -0.75
LINC00963-216ENST00000623185 FAM90A8PA6NJQ4 464 aa10.39□□□□□ -0.75
LINC00963-216ENST00000623185 FAM90A7PA6NKC0 464 aa10.39□□□□□ -0.75
LINC00963-216ENST00000623185 FAM90A22PA8MWA6 464 aa10.39□□□□□ -0.75
LINC00963-216ENST00000623185 TMEM14DPA8MWL7 114 aa10.39□□□□□ -0.75
LINC00963-216ENST00000623185 FAM90A12PA8MX19 464 aa10.39□□□□□ -0.75
LINC00963-216ENST00000623185 FAM90A5PA8MXJ8 464 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms