RNA–Protein interactions for RNA: ENST00000622934.3

SMIM11B-203, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 1,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-203ENST00000622934 DCTN6O00399 190 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 DENRO43583 198 aaKnown RBP6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 DOK2O60496 412 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 CLIC3O95833 236 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 TK1P04183 234 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 RPSAP08865 295 aaKnown RBP6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 MRPL3P09001 348 aaKnown RBP6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 PATE4P0C8F1 98 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 CD28P10747 220 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 MMP9P14780 707 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 MYF6P23409 242 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 DCKP27707 260 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 PPIFP30405 207 aaKnown RBP6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 HOXD3P31249 432 aaPredicted RBP6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 NAA10P41227 235 aaPredicted RBP6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 RGS6P49758 472 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 RIDAP52758 137 aaKnown RBP6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 CXCR4P61073 352 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 ISL1P61371 349 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 MEP1BQ16820 701 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 SPRNQ5BIV9 151 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 RBM48Q5RL73 367 aaKnown RBP6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 C6orf141Q5SZD1 244 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 ATPAF1Q5TC12 328 aaPredicted RBP6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 WDR25Q64LD2 544 aaPredicted RBP6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 CORO6Q6QEF8 472 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 DEGS2Q6QHC5 323 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 FAM220AQ7Z4H9 259 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 LINC00346Q8IVM7 164 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 SLC35F2Q8IXU6 374 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 SPARTQ8N0X7 666 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 BBS1Q8NFJ9 593 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 AKR7LQ8NHP1 331 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 OTOSQ8NHW6 89 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 HAVCR2Q8TDQ0 301 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 NABP1Q96AH0 204 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 TMEM80Q96HE8 168 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 WDFY2Q96P53 400 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 COQ7Q99807 217 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 ATF6BQ99941 703 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 ANKRD60Q9BZ19 345 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 RAB18Q9NP72 206 aa6.16□□□□□ -1.42
SMIM11B-203ENST00000622934 FRAS1Q86XX4 4008 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 ACOD1A6NK06 481 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 M0R129 80 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 DLGAP1O14490 977 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 RER1O15258 196 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 PAX4O43316 350 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 TIMM8AO60220 97 aaPredicted RBP6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 SELENOFO60613 162 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 SULT1C4O75897 302 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 PAHP00439 452 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 LCATP04180 440 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 MMP7P09237 267 aaPredicted RBP6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 DBTP11182 482 aaKnown RBP6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 SLC2A5P22732 501 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 MPV17P39210 176 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 NPY4RP50391 375 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 GBX2P52951 348 aaPredicted RBP6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 ACTA2P62736 377 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 ACTG2P63267 376 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 MRPL28Q13084 256 aaKnown RBP6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 HNRNPA0Q13151 305 aaKnown RBP6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 FHL3Q13643 280 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 ENDOGQ14249 297 aaKnown RBP6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 SPATA46Q5T0L3 261 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 LINC01590Q5TEZ4 76 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 ZFAND6Q6FIF0 208 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 ZNF322Q6U7Q0 402 aaPredicted RBP6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 BCDIN3DQ7Z5W3 292 aaKnown RBP6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 TIGD4Q8IY51 512 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 ZNF679Q8IYX0 411 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 YIPF7Q8N8F6 280 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 PNLDC1Q8NA58 520 aaKnown RBP6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 CNIH3Q8TBE1 160 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 KLF14Q8TD94 323 aaPredicted RBP6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 NPRL2Q8WTW4 380 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 SLAMF6Q96DU3 332 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 C4orf45Q96LM5 186 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 TBX5Q99593 518 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 CITED2Q99967 270 aaPredicted RBP6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 TMEM246Q9BRR3 403 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 ABHD6Q9BV23 337 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 HCAR1Q9BXC0 346 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 CCDC90BQ9GZT6 254 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 AMBNQ9NP70 447 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 PLCXD1Q9NUJ7 323 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 MRPL22Q9NWU5 206 aaKnown RBP6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 CNOT2Q9NZN8 540 aaKnown RBP6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 IL19Q9UHD0 177 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 ATPIF1Q9UII2 106 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 ERGIC3Q9Y282 383 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 EXOGQ9Y2C4 368 aaKnown RBP6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 EXOSC1Q9Y3B2 195 aaKnown RBP6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 LRRC42Q9Y546 428 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 N6AMT1Q9Y5N5 214 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 SNX5Q9Y5X3 404 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 COMMD3-BMI1R4GMX3 469 aa6.15□□□□□ -1.42
SMIM11B-203ENST00000622934 FAM90A18PA6NE21 464 aa6.14□□□□□ -1.43
SMIM11B-203ENST00000622934 FAM90A16PA6NEW6 464 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms