RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 C6orf141Q5SZD1 244 aa11.55□□□□□ -0.56
PCDHGC3-208ENST00000622836 Q8IYB0 196 aa11.55□□□□□ -0.56
PCDHGC3-208ENST00000622836 PARP16Q8N5Y8 322 aa11.55□□□□□ -0.56
PCDHGC3-208ENST00000622836 CD177Q8N6Q3 437 aa11.55□□□□□ -0.56
PCDHGC3-208ENST00000622836 ZFP41Q8N8Y5 198 aa11.55□□□□□ -0.56
PCDHGC3-208ENST00000622836 ASCC1Q8N9N2 400 aaKnown RBP11.55□□□□□ -0.56
PCDHGC3-208ENST00000622836 OR5D18Q8NGL1 313 aa11.55□□□□□ -0.56
PCDHGC3-208ENST00000622836 MYDGFQ969H8 173 aa11.55□□□□□ -0.56
PCDHGC3-208ENST00000622836 SDSLQ96GA7 329 aa11.55□□□□□ -0.56
PCDHGC3-208ENST00000622836 WDFY2Q96P53 400 aa11.55□□□□□ -0.56
PCDHGC3-208ENST00000622836 HES4Q9HCC6 221 aa11.55□□□□□ -0.56
PCDHGC3-208ENST00000622836 ZNF281Q9Y2X9 895 aa11.55□□□□□ -0.56
PCDHGC3-208ENST00000622836 MAB21L2Q9Y586 359 aa11.55□□□□□ -0.56
PCDHGC3-208ENST00000622836 FBN1P35555 2871 aaKnown RBP11.55□□□□□ -0.56
PCDHGC3-208ENST00000622836 ANGPTL7O43827 346 aa11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 LALBAP00709 142 aa11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 MT-ND2P03891 347 aa11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 TMEM225BP0DP42 221 aa11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 SNU13P55769 128 aaKnown RBP11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 WNT4P56705 351 aa11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 ERVK11-1P61568 191 aa11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 PDZK1IP1Q13113 114 aa11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 SATL1Q86VE3 508 aa11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 FAM185AQ8N0U4 392 aa11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 GHSRQ92847 366 aa11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 LHX4Q969G2 390 aa11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 TMEM106AQ96A25 262 aa11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 CPNE2Q96FN4 548 aaPredicted RBP11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 RBFOX1Q9NWB1 397 aaKnown RBP11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 TAS2R4Q9NYW5 299 aa11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 KPTNQ9Y664 436 aa11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 SIRT4Q9Y6E7 314 aaPredicted RBP11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 CUBNO60494 3623 aa11.54□□□□□ -0.56
PCDHGC3-208ENST00000622836 F8VVB4 439 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 F8VWA3 439 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 OGG1O15527 345 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 VENTXO95231 258 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 CHRM2P08172 466 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 CALCBP10092 127 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 PRKACAP17612 351 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 BCL3P20749 454 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 HILS1P60008 231 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 PPP3R1P63098 170 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 COL10A1Q03692 680 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 BLMHQ13867 455 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 PDCD1Q15116 288 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 KRTAP24-1Q3LI83 254 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 BRD3OSQ6XYD6 125 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 USP43Q70EL4 1123 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 FAM58AQ8N1B3 248 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 SIGLECL1Q8N7X8 197 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 LY6G5BQ8NDX9 201 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 RGP1Q92546 391 aaPredicted RBP11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 TBX15Q96SF7 602 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 GPER1Q99527 375 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 MND1Q9BWT6 205 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 ANKRD60Q9BZ19 345 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 SIRPDQ9H106 197 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 GLS2Q9UI32 602 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 TPRKBQ9Y3C4 175 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 PCDHGB5Q9Y5G0 923 aa11.53□□□□□ -0.56
PCDHGC3-208ENST00000622836 TRBV23-1A0A0A0MS06 115 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 TRIM77I1YAP6 450 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 HAND1O96004 215 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 CDK1P06493 297 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 MMP9P14780 707 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 MYF6P23409 242 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 NPBWR2P48146 333 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 RIPK1Q13546 671 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 KISS1Q15726 138 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 YIF1BQ5BJH7 314 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 RUSC1-AS1Q66K80 236 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 DMKNQ6E0U4 476 aaPredicted RBP11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 VMO1Q7Z5L0 202 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 PDZD9Q8IXQ8 264 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 BCL6BQ8N143 479 aaPredicted RBP11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 KIR3DL3Q8N743 410 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 NANOGP1Q8N7R0 232 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 OR13C5Q8NGS8 318 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 C8orf46Q8TAG6 207 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 RPS4Y2Q8TD47 263 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 CNBD2Q96M20 576 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 DMRTB1Q96MA1 342 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 C19orf24Q9BVV8 132 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 FAM192AQ9GZU8 254 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 SIRT7Q9NRC8 400 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 FKBP14Q9NWM8 211 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 CKLFQ9UBR5 152 aa11.52□□□□□ -0.57
PCDHGC3-208ENST00000622836 A0A1W2PPH5 198 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 ALX3O95076 343 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 TK1P04183 234 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 CELP19835 753 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 GABRR1P24046 479 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 DUSP1P28562 367 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 VHLP40337 213 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 EDDM3BP56851 147 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 BPIFB3P59826 476 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 RPL31P62899 125 aaKnown RBP11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 Q499Y3 187 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 GDPD3Q7L5L3 318 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms