RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PCDHB16Q9NRJ7 776 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 NOSIPQ9Y314 301 aaKnown RBP8.16□□□□□ -1.1
PDPN-212ENST00000621990 ZDBF2Q9HCK1 2354 aa8.15□□□□□ -1.1
PDPN-212ENST00000621990 TNRC6AQ8NDV7 1962 aaKnown RBP8.15□□□□□ -1.1
PDPN-212ENST00000621990 ZNF587BE7ETH6 402 aa8.15□□□□□ -1.1
PDPN-212ENST00000621990 SS18L1O75177 396 aaPredicted RBP8.15□□□□□ -1.1
PDPN-212ENST00000621990 PDCD6O75340 191 aa8.15□□□□□ -1.1
PDPN-212ENST00000621990 COX5BP10606 129 aa8.15□□□□□ -1.1
PDPN-212ENST00000621990 ZNF708P17019 499 aa8.15□□□□□ -1.1
PDPN-212ENST00000621990 RRADP55042 308 aa8.15□□□□□ -1.1
PDPN-212ENST00000621990 PRSS12P56730 875 aa8.15□□□□□ -1.1
PDPN-212ENST00000621990 AIMP2Q13155 320 aaKnown RBP8.15□□□□□ -1.1
PDPN-212ENST00000621990 PXDC1Q5TGL8 231 aa8.15□□□□□ -1.1
PDPN-212ENST00000621990 Q6ZPA2 131 aa8.15□□□□□ -1.1
PDPN-212ENST00000621990 ADAMTS17Q8TE56 1095 aa8.15□□□□□ -1.1
PDPN-212ENST00000621990 SIGLEC12Q96PQ1 595 aa8.15□□□□□ -1.1
PDPN-212ENST00000621990 SLC6A15Q9H2J7 730 aa8.15□□□□□ -1.1
PDPN-212ENST00000621990 PARPBPQ9NWS1 579 aa8.15□□□□□ -1.1
PDPN-212ENST00000621990 FOXJ2Q9P0K8 574 aa8.15□□□□□ -1.1
PDPN-212ENST00000621990 B4GALT7Q9UBV7 327 aa8.15□□□□□ -1.1
PDPN-212ENST00000621990 CNTRLQ7Z7A1 2325 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 FAM90A10PA6NDY2 464 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 FAM90A18PA6NE21 464 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 FAM90A16PA6NEW6 464 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 FAM90A20PA6NIJ5 464 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 FAM90A8PA6NJQ4 464 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 FAM90A7PA6NKC0 464 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 FAM90A22PA8MWA6 464 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 FAM90A12PA8MX19 464 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 FAM90A5PA8MXJ8 464 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 FAM90A23PA8MXZ1 464 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 TRIM77I1YAP6 450 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 MRPL33O75394 65 aaKnown RBP8.15□□□□□ -1.11
PDPN-212ENST00000621990 HOXB5P09067 269 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 FAM90A15PP0C7V4 464 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 FAM90A13PP0C7W8 464 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 FAM90A14PP0C7W9 464 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 FAM90A24PP0C7X0 464 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 JMJD7P0C870 316 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 HKR1P10072 659 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 UCP3P55916 312 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 SPEM2Q0P670 501 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 LPAL2Q16609 132 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 SMUG1Q53HV7 270 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 PLCXD3Q63HM9 321 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 TMEM211Q6ICI0 200 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 Q6ZS49 121 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.15□□□□□ -1.11
PDPN-212ENST00000621990 MARS2Q96GW9 593 aaKnown RBP8.15□□□□□ -1.11
PDPN-212ENST00000621990 REPIN1Q9BWE0 567 aaKnown RBP8.15□□□□□ -1.11
PDPN-212ENST00000621990 C12orf4Q9NQ89 552 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 SLC7A10Q9NS82 523 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 ST3GAL6Q9Y274 331 aa8.15□□□□□ -1.11
PDPN-212ENST00000621990 PQLC2LA1A4F0 135 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 LNP1A1A4G5 178 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 ZNF724A8MTY0 619 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 DEDDO75618 318 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 PLATP00750 562 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 APOC3P02656 99 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 CELA3AP09093 270 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 OPRM1P35372 400 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 PIGPP57054 158 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 SRSF7Q16629 238 aaKnown RBP eCLIP8.14□□□□□ -1.11
PDPN-212ENST00000621990 IAH1Q2TAA2 248 aaPredicted RBP8.14□□□□□ -1.11
PDPN-212ENST00000621990 C10orf91Q5T1B1 145 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 ZNF585AQ6P3V2 769 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 ATRAIDQ6UW56 229 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 CALHM1Q8IU99 346 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 SAXO1Q8IYX7 474 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 DEFB123Q8N688 67 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 FNDC9Q8TBE3 224 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 NAA60Q9H7X0 242 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 ASF1BQ9NVP2 202 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 LPAR3Q9UBY5 353 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 F10P00742 488 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 ZNF728P0DKX0 622 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 ARF1P84077 181 aaKnown RBP8.14□□□□□ -1.11
PDPN-212ENST00000621990 TMEM187Q14656 261 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 MST1LQ2TV78 715 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 ABHD17BQ5VST6 288 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 TMED6Q8WW62 240 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 MOB3AQ96BX8 217 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 SAT2Q96F10 170 aaPredicted RBP8.14□□□□□ -1.11
PDPN-212ENST00000621990 SMIM8Q96KF7 97 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 MICU1Q9BPX6 476 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 ARRDC1-AS1Q9H2J1 176 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 ZNF286AQ9HBT8 521 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 ACKR4Q9NPB9 350 aa8.14□□□□□ -1.11
PDPN-212ENST00000621990 TMEM218A2RU14 115 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 ZNF850A8MQ14 1090 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 PRSS44E7EML9 344 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 ACTL6AO96019 429 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 CST4P01036 141 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 GAPDHP04406 335 aaKnown RBP8.13□□□□□ -1.11
PDPN-212ENST00000621990 FUT3P21217 361 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 EIF5AP63241 154 aaKnown RBP8.13□□□□□ -1.11
PDPN-212ENST00000621990 MALLQ13021 153 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 DCAF10Q5QP82 559 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 PLA2G2CQ5R387 149 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 GGNBP1Q5YKI7 109 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms