RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 OR12D2P58182 307 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 PSPHP78330 225 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 SLC25A11Q02978 314 aaKnown RBP2.66□□□□□ -1.98
BRCA1-229ENST00000621897 EDDM3AQ14507 147 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 CLINT1Q14677 625 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 GINS1Q14691 196 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 OR1Q1Q15612 314 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 ZNF726P1Q15940 193 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 CLEC12BQ2HXU8 276 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 HLA-DRB5Q30154 266 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 TMEM97Q5BJF2 176 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 HIST2H3PS2Q5TEC6 136 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 UBE2UQ5VVX9 321 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 FAM71E1Q6IPT2 247 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 EPGNQ6UW88 154 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 OLIG3Q7RTU3 272 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 ATPAF2Q8N5M1 289 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 NATD1Q8N6N6 113 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 ACOT4Q8N9L9 421 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 GATD1Q8NB37 220 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 OR5AR1Q8NGP9 310 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 OR2A1Q8NGT9 310 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 OR56B4Q8NH76 319 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 STOML3Q8TAV4 291 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 EEF1AKMT1Q8WVE0 214 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 KCTD4Q8WVF5 259 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 CMTM7Q96FZ5 175 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 PAGE5Q96GU1 130 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 UBE2E2Q96LR5 201 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 DOK1Q99704 481 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 GABRG3Q99928 467 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 MRPL45Q9BRJ2 306 aaKnown RBP2.66□□□□□ -1.98
BRCA1-229ENST00000621897 ZNF717Q9BY31 904 aaPredicted RBP2.66□□□□□ -1.98
BRCA1-229ENST00000621897 OR51J1Q9H342 316 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 FAM206AQ9NX38 181 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 COMMD9Q9P000 198 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 VPS29Q9UBQ0 182 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 LTBP1Q14766 1721 aa2.65□□□□□ -1.98
BRCA1-229ENST00000621897 A0A1B0GWB2 263 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 ISPDA4D126 451 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 OR6C6A6NF89 314 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 CEACAM18A8MTB9 384 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 ZNF878C9JN71 531 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 ANKRD65E5RJM6 399 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 PPP5D1E7EU14 171 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 K7EMT4 169 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 KPNA4O00629 521 aaPredicted RBP2.65□□□□□ -1.99
BRCA1-229ENST00000621897 SLC31A2O15432 143 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 ARPC5O15511 151 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 PLIN3O60664 434 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 ICOSLGO75144 302 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 CA11O75493 328 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 LALBAP00709 142 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 CD55P08174 381 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 MRPL3P09001 348 aaKnown RBP2.65□□□□□ -1.99
BRCA1-229ENST00000621897 GABRG2P18507 467 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 USF1P22415 310 aaPredicted RBP2.65□□□□□ -1.99
BRCA1-229ENST00000621897 SLC2A5P22732 501 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 ELK4P28324 431 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 RPL12P30050 165 aaKnown RBP2.65□□□□□ -1.99
BRCA1-229ENST00000621897 GRPRP30550 384 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 GALR1P47211 349 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 GSSP48637 474 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 SUB1P53999 127 aaKnown RBP eCLIP2.65□□□□□ -1.99
BRCA1-229ENST00000621897 CDKN2DP55273 166 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 LIM2P55344 173 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 CDC42P60953 191 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 SKP2Q13309 424 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 EBI3Q14213 229 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 ZNF235Q14590 738 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 OR7A5Q15622 319 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 TSNQ15631 228 aaKnown RBP2.65□□□□□ -1.99
BRCA1-229ENST00000621897 C4orf26Q17RF5 130 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 OR2B11Q5JQS5 317 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 GPRC6AQ5T6X5 926 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 WDR74Q6RFH5 385 aaPredicted RBP2.65□□□□□ -1.99
BRCA1-229ENST00000621897 SMARCD3Q6STE5 483 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 CXCL17Q6UXB2 119 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 C10orf107Q8IVU9 208 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 ZADH2Q8N4Q0 377 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 ARIH2OSQ8N7S6 290 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 OR51Q1Q8NH59 317 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 RNASE11Q8TAA1 199 aaKnown RBP2.65□□□□□ -1.99
BRCA1-229ENST00000621897 ZFAND1Q8TCF1 268 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 ARPC1AQ92747 370 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 TMBIM1Q969X1 311 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 DDIT4LQ96D03 193 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 ZMYND19Q96E35 227 aaPredicted RBP2.65□□□□□ -1.99
BRCA1-229ENST00000621897 ZHX1-C8orf76Q96EF9 292 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 DYNLL2Q96FJ2 89 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 MRAP2Q96G30 205 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 COL21A1Q96P44 957 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 TSC22D3Q99576 134 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 TMED9Q9BVK6 235 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 SLC25A39Q9BZJ4 359 aaPredicted RBP2.65□□□□□ -1.99
BRCA1-229ENST00000621897 SLC19A3Q9BZV2 496 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 TXNIPQ9H3M7 391 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 TAS2R13Q9NYV9 303 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 RWDD2AQ9UIY3 292 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 VPREB3Q9UKI3 123 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms