RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 WFDC6Q9BQY6 131 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 TMPRSS13Q9BYE2 586 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 WDR13Q9H1Z4 485 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 RAXQ9Y2V3 346 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 STARD10Q9Y365 291 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 ZNF354AO60765 605 aaPredicted RBP8.12□□□□□ -1.11
GGA3-223ENST00000621870 IGKV3-11P04433 115 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 HOXD4P09016 255 aaPredicted RBP8.12□□□□□ -1.11
GGA3-223ENST00000621870 HIST1H1DP16402 221 aaKnown RBP8.12□□□□□ -1.11
GGA3-223ENST00000621870 PTBP1P26599 531 aaKnown RBP eCLIP8.12□□□□□ -1.11
GGA3-223ENST00000621870 PPT1P50897 306 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 GZMMP51124 257 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 OR13C8Q8NGS7 320 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 CMTM2Q8TAZ6 248 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 GPX8Q8TED1 209 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 CNTNAP3BQ96NU0 1288 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 PRSS27Q9BQR3 290 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 FRRS1LQ9P0K9 344 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 OR4C45A6NMZ5 311 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 A8MXE2 369 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 DXOO77932 396 aaKnown RBP8.12□□□□□ -1.11
GGA3-223ENST00000621870 HPNP05981 417 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 RFPL3SP0C7P2 107 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 TBPP20226 339 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 CTF1Q16619 201 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 CLN8Q9UBY8 286 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 OR5V1Q9UGF6 321 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 DCTN6O00399 190 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 SSSCA1O60232 199 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 FCGR3BO75015 233 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 PRF1P14222 555 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 CALCRP30988 508 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 MGAT2Q10469 447 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 BAK1Q16611 211 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 Q3ZCU0 254 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 BTNL3Q6UXE8 466 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 SUMF2Q8NBJ7 301 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 OR1S2Q8NGQ3 325 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 TMEM230Q96A57 120 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 CNTNAP3Q9BZ76 1288 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 KCNK15Q9H427 330 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 AKIP1Q9NQ31 210 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 EXOGQ9Y2C4 368 aaKnown RBP8.11□□□□□ -1.11
GGA3-223ENST00000621870 DICER1Q9UPY3 1922 aaKnown RBP8.11□□□□□ -1.11
GGA3-223ENST00000621870 ZFP92A6NM28 416 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 C9orf172C9J069 976 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 SULT1C2O00338 296 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 DFFBO76075 338 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 COX6B1P14854 86 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 DTYMKP23919 212 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 CRYBB2P43320 205 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 KLRB1Q12918 225 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 FAM27BQ5VT28 67 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 ARRDC1Q8N5I2 433 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 OR10P1Q8NGE3 313 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 ADAMTS17Q8TE56 1095 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 RNF133Q8WVZ7 376 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 CYSLTR2Q9NS75 346 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 LCTP09848 1927 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 CD59P13987 128 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 CTSSP25774 331 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 MMP16P51512 607 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 C8orf82Q6P1X6 216 aaPredicted RBP8.11□□□□□ -1.11
GGA3-223ENST00000621870 COMMD7Q86VX2 200 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 APH1BQ8WW43 257 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 WNT2BQ93097 391 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 GAL3ST2Q9H3Q3 398 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 RNF7Q9UBF6 113 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 ABCA2Q9BZC7 2435 aa8.11□□□□□ -1.11
GGA3-223ENST00000621870 GPR31O00270 319 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 CRYZL1O95825 349 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 PNPP00491 289 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 CELA3AP09093 270 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 OR4E1P0C645 316 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 GPR6P46095 362 aaPredicted RBP8.1□□□□□ -1.11
GGA3-223ENST00000621870 PSG4Q00888 419 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 GGTLC2Q14390 218 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 PNLIPRP3Q17RR3 467 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 LINC00303Q3SY05 128 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 VMA21Q3ZAQ7 101 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 SKA3Q8IX90 412 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 OR5D13Q8NGL4 314 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 SFT2D1Q8WV19 159 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 GINS3Q9BRX5 216 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 CISD1Q9NZ45 108 aaKnown RBP8.1□□□□□ -1.11
GGA3-223ENST00000621870 IL36GQ9NZH8 169 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 OR6C3Q9NZP0 311 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 HEATR5BQ9P2D3 2071 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 GREB1Q4ZG55 1949 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 WDR87Q6ZQQ6 2873 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 NUPL2O15504 423 aaKnown RBP8.1□□□□□ -1.11
GGA3-223ENST00000621870 OPN1MWP04001 364 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 IL5P05113 134 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 ASAH2BP0C7U1 165 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 OPN1MW2P0DN77 364 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 OPN1MW3P0DN78 364 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 LIMK1P53667 647 aa8.1□□□□□ -1.11
GGA3-223ENST00000621870 DMKNQ6E0U4 476 aaPredicted RBP8.1□□□□□ -1.11
GGA3-223ENST00000621870 ZNF770Q6IQ21 691 aaPredicted RBP8.1□□□□□ -1.11
GGA3-223ENST00000621870 TIMP4Q99727 224 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms