RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ING4Q9UNL4 249 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 POLDIP2Q9Y2S7 368 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 IGKV1D-17A0A075B6S4 117 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 CEACAM18A8MTB9 384 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 TNFRSF13BO14836 293 aaPredicted RBP11.39□□□□□ -0.59
NEK3-210ENST00000620675 SMAD7O15105 426 aaKnown RBP11.39□□□□□ -0.59
NEK3-210ENST00000620675 CD37P11049 281 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 SLC2A2P11168 524 aaPredicted RBP11.39□□□□□ -0.59
NEK3-210ENST00000620675 PSG2P11465 335 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 MYL9P24844 172 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 DSCR9P59020 149 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 LMO4P61968 165 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 PLA2G7Q13093 441 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 P2RY14Q15391 338 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 FAM166AQ6J272 317 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 GLIPR1L1Q6UWM5 242 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 ANKRD13BQ86YJ7 626 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 CLVS1Q8IUQ0 354 aaPredicted RBP11.39□□□□□ -0.59
NEK3-210ENST00000620675 TIMD4Q96H15 378 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 CCL13Q99616 98 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 GAL3ST1Q99999 423 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 DNAJB11Q9UBS4 358 aa11.39□□□□□ -0.59
NEK3-210ENST00000620675 MRPS28Q9Y2Q9 187 aaKnown RBP11.39□□□□□ -0.59
NEK3-210ENST00000620675 NSD1Q96L73 2696 aaPredicted RBP11.38□□□□□ -0.59
NEK3-210ENST00000620675 RFPL4AA6NLU0 287 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 RFPL4AL1F8VTS6 287 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 TRAPPC2LH3BP13 241 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 IFNL4K9M1U5 179 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 KDM4BO94953 1096 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 MDH2P40926 338 aaKnown RBP11.38□□□□□ -0.59
NEK3-210ENST00000620675 SLC22A6Q4U2R8 563 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 C1orf100Q5SVJ3 147 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 STUMQ69YW2 141 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 ASCL4Q6XD76 172 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 PEG10Q86TG7 708 aaKnown RBP11.38□□□□□ -0.59
NEK3-210ENST00000620675 MKXQ8IYA7 352 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 CD177Q8N6Q3 437 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 FAM216BQ8N7L0 139 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 NKAIN3Q8N8D7 197 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 TMEM104Q8NE00 496 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 ANGPTL6Q8NI99 470 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 EMG1Q92979 244 aaKnown RBP11.38□□□□□ -0.59
NEK3-210ENST00000620675 SLC25A28Q96A46 364 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 SLITRK2Q9H156 845 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 NLKQ9UBE8 527 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 OR14J1Q9UGF5 321 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 GSTK1Q9Y2Q3 226 aa11.38□□□□□ -0.59
NEK3-210ENST00000620675 MEGF11A6BM72 1044 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 OR2AT4A6NND4 320 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 FAM157AC9JC47 383 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 GABARAPO95166 117 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 SLC25A16P16260 332 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 PRKACAP17612 351 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 RAB3BP20337 219 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 SERPINA2P20848 420 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 PIGYQ3MUY2 71 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 GLT8D1Q68CQ7 371 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 AWAT2Q6E213 333 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 PXT1Q8NFP0 134 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 FAM46BQ96A09 425 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 BANF2Q9H503 90 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 ZNF222Q9UK12 451 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 V9GY05 133 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 SLC22A1O15245 554 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 HTR3BO95264 441 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 ACAA1P09110 424 aaPredicted RBP11.37□□□□□ -0.59
NEK3-210ENST00000620675 USF1P22415 310 aaPredicted RBP11.37□□□□□ -0.59
NEK3-210ENST00000620675 RPS19P39019 145 aaKnown RBP11.37□□□□□ -0.59
NEK3-210ENST00000620675 MTNR1BP49286 362 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 MICBQ29980 383 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 FAM58AQ8N1B3 248 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 ZSCAN4Q8NAM6 433 aaPredicted RBP11.37□□□□□ -0.59
NEK3-210ENST00000620675 NDNFQ8TB73 568 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 UQCC2Q9BRT2 126 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 PLGRKTQ9HBL7 147 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 HMG20AQ9NP66 347 aa11.37□□□□□ -0.59
NEK3-210ENST00000620675 TRAV38-1A0A0B4J264 116 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 SLC17A2O00624 439 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 IGHV2-5P01817 119 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 HTR2CP28335 458 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 GABRA2P47869 451 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 RSU1Q15404 277 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 SMIM21Q3B7S5 101 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 TIMM50Q3ZCQ8 353 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 GDPGP1Q6ZNW5 385 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 SAXO1Q8IYX7 474 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 PNLDC1Q8NA58 520 aaKnown RBP11.36□□□□□ -0.59
NEK3-210ENST00000620675 OR51D1Q8NGF3 324 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 GAFA1Q96PS6 74 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 MAB21L2Q9Y586 359 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 PHF1O43189 567 aaPredicted RBP11.36□□□□□ -0.59
NEK3-210ENST00000620675 ADAM20O43506 726 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 CYB5AP00167 134 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 VSIG8P0DPA2 414 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 MUC1P15941 1255 aaPredicted RBP11.36□□□□□ -0.59
NEK3-210ENST00000620675 UNC119Q13432 240 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 TMEM155Q4W5P6 130 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 SPNS3Q6ZMD2 512 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 RTN4RL2Q86UN3 420 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 CDH26Q8IXH8 852 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms