RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 ZNF611Q8N823 705 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 ZDHHC22Q8N966 263 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 CMSS1Q9BQ75 279 aaKnown RBP10.73□□□□□ -0.69
CIITA-212ENST00000618207 TINAGQ9UJW2 476 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 CACNA1DQ01668 2161 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 CADP27708 2225 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 ZNF816-ZNF321PA0A0X1KG74 233 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 PDGFAP04085 211 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 SERPINF1P36955 418 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 SOX8P57073 446 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 FXYD4P59646 89 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 MRPL21Q7Z2W9 205 aaKnown RBP10.72□□□□□ -0.69
CIITA-212ENST00000618207 OR5M9Q8NGP3 310 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 MITD1Q8WV92 249 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 EMG1Q92979 244 aaKnown RBP10.72□□□□□ -0.69
CIITA-212ENST00000618207 TMEM230Q96A57 120 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 TMEM45BQ96B21 275 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 ZNF2Q9BSG1 426 aaPredicted RBP10.72□□□□□ -0.69
CIITA-212ENST00000618207 KMT2EQ8IZD2 1858 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 RPS10-NUDT3A0A1W2PQS6 291 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 FIGNL2A6NMB9 653 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 I3L521 148 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 MSTNO14793 375 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 PDZK1IP1Q13113 114 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 FAM189A2Q15884 450 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 AADACL3Q5VUY0 350 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 RPUSD3Q6P087 351 aaKnown RBP10.72□□□□□ -0.69
CIITA-212ENST00000618207 BEND4Q6ZU67 534 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 COMMD7Q86VX2 200 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 ZSCAN4Q8NAM6 433 aaPredicted RBP10.72□□□□□ -0.69
CIITA-212ENST00000618207 ZFP62Q8NB50 900 aaPredicted RBP10.72□□□□□ -0.69
CIITA-212ENST00000618207 RELL2Q8NC24 303 aaPredicted RBP10.72□□□□□ -0.69
CIITA-212ENST00000618207 OR10AD1Q8NGE0 317 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 OR5AP2Q8NGF4 316 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 C10orf35Q96D05 121 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 IP6K3Q96PC2 410 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 HS3ST6Q96QI5 342 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 IL36RNQ9UBH0 155 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 GPR132Q9UNW8 380 aa10.72□□□□□ -0.69
CIITA-212ENST00000618207 DIDO1Q9BTC0 2240 aaKnown RBP10.72□□□□□ -0.69
CIITA-212ENST00000618207 TRAV20A0A0B4J274 112 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 RFPL4AA6NLU0 287 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 FOXI3A8MTJ6 420 aaPredicted RBP10.71□□□□□ -0.69
CIITA-212ENST00000618207 SERPINE3A8MV23 424 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 RFPL4AL1F8VTS6 287 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 LILRA1O75019 489 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 NDUFS6O75380 124 aaKnown RBP10.71□□□□□ -0.69
CIITA-212ENST00000618207 HOXB5P09067 269 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 ALDH3B1P43353 468 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 CLEC18BQ6UXF7 455 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 GSG1LQ6UXU4 331 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 LHFPL2Q6ZUX7 228 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 OSR2Q8N2R0 312 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 SLAMF9Q96A28 289 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 NUDT16L1Q9BRJ7 211 aaKnown RBP10.71□□□□□ -0.69
CIITA-212ENST00000618207 TM2D1Q9BX74 207 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 GSX2Q9BZM3 304 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 GSKIPQ9P0R6 139 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 SLC22A20A6NK97 555 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 F8VVB4 439 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 F8VWA3 439 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 XRCC2O43543 280 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 TBPP20226 339 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 CLN3Q13286 438 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 TMEM128Q5BJH2 165 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 FAM74A1Q5RGS3 127 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 VAX1Q5SQQ9 334 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 P4HA3Q7Z4N8 544 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 ARRDC1Q8N5I2 433 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 RTBDNQ9BSG5 229 aaPredicted RBP10.71□□□□□ -0.69
CIITA-212ENST00000618207 C1QTNF5Q9BXJ0 243 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 ZNF442Q9H7R0 627 aa10.71□□□□□ -0.69
CIITA-212ENST00000618207 METTL8Q9H825 291 aaKnown RBP10.71□□□□□ -0.69
CIITA-212ENST00000618207 PCNX1Q96RV3 2341 aa10.71□□□□□ -0.7
CIITA-212ENST00000618207 C4BPBP20851 252 aa10.71□□□□□ -0.7
CIITA-212ENST00000618207 DHODHQ02127 395 aa10.71□□□□□ -0.7
CIITA-212ENST00000618207 PRDX4Q13162 271 aa10.71□□□□□ -0.7
CIITA-212ENST00000618207 MPPED2Q15777 294 aa10.71□□□□□ -0.7
CIITA-212ENST00000618207 WDYHV1Q96HA8 205 aa10.71□□□□□ -0.7
CIITA-212ENST00000618207 CXorf58Q96LI9 332 aa10.71□□□□□ -0.7
CIITA-212ENST00000618207 BCO1Q9HAY6 547 aa10.71□□□□□ -0.7
CIITA-212ENST00000618207 PRSS47A8MTI9 375 aa10.7□□□□□ -0.7
CIITA-212ENST00000618207 HMSDA8MTL9 139 aa10.7□□□□□ -0.7
CIITA-212ENST00000618207 DUS4LO95620 317 aaKnown RBP10.7□□□□□ -0.7
CIITA-212ENST00000618207 ZNF250P15622 560 aa10.7□□□□□ -0.7
CIITA-212ENST00000618207 FUT6P51993 359 aa10.7□□□□□ -0.7
CIITA-212ENST00000618207 SUPT4H1P63272 117 aaKnown RBP10.7□□□□□ -0.7
CIITA-212ENST00000618207 PLP2Q04941 152 aa10.7□□□□□ -0.7
CIITA-212ENST00000618207 OR8B8Q15620 311 aa10.7□□□□□ -0.7
CIITA-212ENST00000618207 ANKRD55Q3KP44 614 aa10.7□□□□□ -0.7
CIITA-212ENST00000618207 C11orf87Q6NUJ2 197 aa10.7□□□□□ -0.7
CIITA-212ENST00000618207 OVCH2Q7RTZ1 564 aa10.7□□□□□ -0.7
CIITA-212ENST00000618207 TMEM178AQ8NBL3 297 aa10.7□□□□□ -0.7
CIITA-212ENST00000618207 MARS2Q96GW9 593 aaKnown RBP10.7□□□□□ -0.7
CIITA-212ENST00000618207 ZNF488Q96MN9 340 aa10.7□□□□□ -0.7
CIITA-212ENST00000618207 WDR13Q9H1Z4 485 aa10.7□□□□□ -0.7
CIITA-212ENST00000618207 ATMQ13315 3056 aa10.7□□□□□ -0.7
CIITA-212ENST00000618207 DMXL2Q8TDJ6 3036 aa10.7□□□□□ -0.7
CIITA-212ENST00000618207 LYZL6O75951 148 aa10.7□□□□□ -0.7
CIITA-212ENST00000618207 SNAPINO95295 136 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms