RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 RAB39BQ96DA2 213 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 NUDT11Q96G61 164 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 FNDC11Q9BVV2 318 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 NUAK2Q9H093 628 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 C7orf69Q9H7B7 122 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 RNF121Q9H920 327 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 CDH20Q9HBT6 801 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 C20orf141Q9NUB4 165 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 TAAR3PQ9P1P4 343 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 NUFIP1Q9UHK0 495 aaKnown RBP7.24□□□□□ -1.25
GPC6-202ENST00000617456 ING4Q9UNL4 249 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 TIMM10BQ9Y5J6 103 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 CMYA5Q8N3K9 4069 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 A0A075B6Q4 140 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 ELOA3CA0A087WX78 387 aaPredicted RBP7.23□□□□□ -1.25
GPC6-202ENST00000617456 A0A1B0GW55 424 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 FAM74A7A6NL05 159 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 J3QLI3 93 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 F13BP05160 661 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 DUX4L2P0CJ85 424 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 DUX4L3P0CJ86 424 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 DUX4L4P0CJ87 422 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 DUX4L5P0CJ88 424 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 DUX4L6P0CJ89 424 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 DUX4L7P0CJ90 424 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 PVALBP20472 110 aaPredicted RBP7.23□□□□□ -1.25
GPC6-202ENST00000617456 CPT2P23786 658 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 STOMP27105 288 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 OR1E2P47887 323 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 RFX2P48378 723 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 CEBPDP49716 269 aaPredicted RBP7.23□□□□□ -1.25
GPC6-202ENST00000617456 ZNF81P51508 661 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 WNT4P56705 351 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 RPS20P60866 119 aaKnown RBP7.23□□□□□ -1.25
GPC6-202ENST00000617456 LCN2P80188 198 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 IL18R1Q13478 541 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 MELKQ14680 651 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 MED22Q15528 200 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 ATP6AP1Q15904 470 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 BSXQ3C1V8 233 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 ZNF718Q3SXZ3 478 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 FAM74A3Q4VXF1 159 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 IFI44LQ53G44 452 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 SLC35F1Q5T1Q4 408 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 OAFQ86UD1 273 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 SNX29P2Q8IUI4 249 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 FAM89BQ8N5H3 189 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 ZNF283Q8N7M2 679 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 LRRC75AQ8NAA5 344 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 UXS1Q8NBZ7 420 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 OR13D1Q8NGV5 346 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 PFN4Q8NHR9 129 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 MCFD2Q8NI22 146 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 FGFBP3Q8TAT2 258 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 NABP1Q96AH0 204 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 KCTD12Q96CX2 325 aaKnown RBP7.23□□□□□ -1.25
GPC6-202ENST00000617456 YIPF6Q96EC8 236 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 POM121L2Q96KW2 1035 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 ADI1Q9BV57 179 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 PPIL3Q9H2H8 161 aaKnown RBP7.23□□□□□ -1.25
GPC6-202ENST00000617456 PPP1R3EQ9H7J1 279 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 ELOVL3Q9HB03 270 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 EMC7Q9NPA0 242 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 CCNB1IP1Q9NPC3 277 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 IL1RAPQ9NPH3 570 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 HINT3Q9NQE9 182 aaKnown RBP7.23□□□□□ -1.25
GPC6-202ENST00000617456 SMPD3Q9NY59 655 aaPredicted RBP7.23□□□□□ -1.25
GPC6-202ENST00000617456 DUX4Q9UBX2 424 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 OPN4Q9UHM6 478 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 NDRG4Q9ULP0 352 aaKnown RBP7.23□□□□□ -1.25
GPC6-202ENST00000617456 TBC1D24Q9ULP9 559 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 FBXO7Q9Y3I1 522 aa7.23□□□□□ -1.25
GPC6-202ENST00000617456 A0A087WUU8 490 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 DNAJC9-AS1A6NH13 148 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 CXCR6O00574 342 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 DLGAP1O14490 977 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 CD14P08571 375 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 PATE4P0C8F1 98 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 FAM157BP0CG42 384 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 ZNF25P17030 456 aaPredicted RBP7.22□□□□□ -1.25
GPC6-202ENST00000617456 GATA3P23771 443 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 MYL9P24844 172 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 GCH1P30793 250 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 RAB5CP51148 216 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 CCR6P51684 374 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 SMIM11AP58511 58 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 PSMA6P60900 246 aaKnown RBP7.22□□□□□ -1.25
GPC6-202ENST00000617456 LSM6P62312 80 aaKnown RBP7.22□□□□□ -1.25
GPC6-202ENST00000617456 FHL1Q13642 323 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 GPR176Q14439 515 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 OR8G1Q15617 311 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 SNAPC1Q16533 368 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 C5orf64Q2M2E5 130 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 PLA1AQ53H76 456 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 UQCC3Q6UW78 93 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 BTNL3Q6UXE8 466 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 CCDC190Q86UF4 302 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 PARP16Q8N5Y8 322 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 OR52N4Q8NGI2 321 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 OR8D4Q8NGM9 314 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms