RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 Q6ZRG5 221 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 TIPARPQ7Z3E1 657 aaKnown RBP8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 C6orf201Q7Z4U5 140 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 OR1K1Q8NGR3 316 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 OR2J1Q9GZK6 312 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 ZNF665Q9H7R5 613 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 ZFC3H1O60293 1989 aaKnown RBP8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 A0A0U1RQK1 487 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 SNRPGP15A8MWD9 76 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 CCSO14618 274 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 SIX6O95475 246 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 SNRNP70P08621 437 aaKnown RBP8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 OR4E1P0C645 316 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 SERPINF1P36955 418 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 MAGEB1P43366 347 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 CFHR1Q03591 330 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 BAMBIQ13145 260 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 INSL4Q14641 139 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 FAAP20Q6NZ36 180 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 LYG2Q86SG7 212 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 NAA40Q86UY6 237 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 LYG1Q8N1E2 194 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 MFSD4AQ8N468 514 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 SPICQ8N5J4 248 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 RFESDQ8TAC1 157 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 ZPLD1Q8TCW7 415 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 EP300Q09472 2414 aaPredicted RBP8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 MS4A18H0YCH9 400 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 TMPRSS2O15393 492 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 HAND1O96004 215 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 HRASP01112 189 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 PCMT1P22061 227 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 GNG10P50151 68 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 UCP2P55851 309 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 MPV17LQ2QL34 196 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 MS4A18Q3C1V0 323 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 CCDC190Q86UF4 302 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 ZNF519Q8TB69 540 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 AICDAQ9GZX7 198 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 A0A0U1RQV5 110 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 TGFBR3LH3BV60 316 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 FAM87AP0C7U9 286 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 FPR2P25090 351 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 SKA3Q8IX90 412 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 SVBPQ8N300 66 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 NFAM1Q8NET5 270 aaPredicted RBP8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 DDOQ99489 341 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 PTDSS2Q9BVG9 487 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 CA10Q9NS85 328 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 BOLA1Q9Y3E2 137 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 NINQ8N4C6 2090 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 ASXL3Q9C0F0 2248 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 HPNP05981 417 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 PCNPQ8WW12 178 aaKnown RBP8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 DAZAP1Q96EP5 407 aaKnown RBP8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 WDFY2Q96P53 400 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 SRXN1Q9BYN0 137 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 ELOVL5Q9NYP7 299 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 APC2O95996 2303 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 NPIPB13A6NJU9 1138 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 NPIPB4C9JG80 1138 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 COX7A1P24310 79 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 HLXQ14774 488 aaPredicted RBP8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 ZNF658BQ4V348 819 aaPredicted RBP8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 CST9LP1Q5W188 147 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 OR4S1Q8NGB4 309 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 OR10P1Q8NGE3 313 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 MRGPRDQ8TDS7 321 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 CNTNAP3Q9BZ76 1288 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 AKIP1Q9NQ31 210 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 RAXQ9Y2V3 346 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 STRAPQ9Y3F4 350 aaKnown RBP8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 F6UZH7 168 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 SSX4O60224 188 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 TGM1P22735 817 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 KIR2DS2P43631 304 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 OR3A1P47881 315 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 BTN1A1Q13410 526 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 RTP5Q14D33 572 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 TMEM128Q5BJH2 165 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 SPANXN5Q5MJ07 72 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 LINC00596Q86U02 117 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 SLC51BQ86UW2 128 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 ZDHHC22Q8N966 263 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 HSD17B11Q8NBQ5 300 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 FYTTD1Q96QD9 318 aaKnown RBP8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 NUDT16L1Q9BRJ7 211 aaKnown RBP8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 MSL2Q9HCI7 577 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 MTFP1Q9UDX5 166 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 PSG11Q9UQ72 335 aa8.26□□□□□ -1.09
CLTCL1-208ENST00000615606 NCBP2LA6PVI3 153 aaKnown RBP8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 CA11O75493 328 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 YIF1AO95070 293 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 GPR6P46095 362 aaPredicted RBP8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 ZNF816Q0VGE8 651 aaPredicted RBP8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 SCGB2A2Q13296 93 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 FAM213BQ8TBF2 198 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 AKR1E2Q96JD6 320 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 POM121L2Q96KW2 1035 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 SLIRPQ9GZT3 109 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms