RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 C3orf80F5H4A9 247 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 F8VVB4 439 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 F8VWA3 439 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 CRTAPO75718 401 aaPredicted RBP12.34□□□□□ -0.43
CD48-203ENST00000613788 VSIG8P0DPA2 414 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 PRKACAP17612 351 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 EGR1P18146 543 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 CD80P33681 288 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 FGF12P61328 243 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 BTG1P62324 171 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 FAM201AQ5SY85 155 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 FOXB2Q5VYV0 432 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 TEX36Q5VZQ5 186 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 SFRP4Q6FHJ7 346 aaPredicted RBP12.34□□□□□ -0.43
CD48-203ENST00000613788 PRSS57Q6UWY2 283 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 OR2W3Q7Z3T1 314 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 BATF2Q8N1L9 274 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 OSR2Q8N2R0 312 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 ACOT12Q8WYK0 555 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 PIMREGQ9BSJ6 248 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 BARHL1Q9BZE3 327 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 NLKQ9UBE8 527 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 FBLN5Q9UBX5 448 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 GLS2Q9UI32 602 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 CHD3Q12873 2000 aaKnown RBP12.34□□□□□ -0.43
CD48-203ENST00000613788 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.33□□□□□ -0.44
CD48-203ENST00000613788 ZNF205O95201 554 aa12.33□□□□□ -0.44
CD48-203ENST00000613788 KNG1P01042 644 aa12.33□□□□□ -0.44
CD48-203ENST00000613788 RBMXP38159 391 aaKnown RBP12.33□□□□□ -0.44
CD48-203ENST00000613788 DYNC1I2Q13409 638 aaKnown RBP12.33□□□□□ -0.44
CD48-203ENST00000613788 ZMYND11Q15326 602 aa12.33□□□□□ -0.44
CD48-203ENST00000613788 FAM189A2Q15884 450 aa12.33□□□□□ -0.44
CD48-203ENST00000613788 SPIN3Q5JUX0 258 aa12.33□□□□□ -0.44
CD48-203ENST00000613788 LRRC28Q86X40 367 aaPredicted RBP12.33□□□□□ -0.44
CD48-203ENST00000613788 MUC20Q8N307 709 aaPredicted RBP12.33□□□□□ -0.44
CD48-203ENST00000613788 DEFB108BQ8NET1 73 aa12.33□□□□□ -0.44
CD48-203ENST00000613788 OR51T1Q8NGJ9 327 aa12.33□□□□□ -0.44
CD48-203ENST00000613788 POM121Q96HA1 1249 aa12.33□□□□□ -0.44
CD48-203ENST00000613788 CCDC59Q9P031 241 aaKnown RBP12.33□□□□□ -0.44
CD48-203ENST00000613788 OR5V1Q9UGF6 321 aa12.33□□□□□ -0.44
CD48-203ENST00000613788 RAB22AQ9UL26 194 aa12.33□□□□□ -0.44
CD48-203ENST00000613788 WIPI2Q9Y4P8 454 aa12.33□□□□□ -0.44
CD48-203ENST00000613788 ABCA12Q86UK0 2595 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 OR2AT4A6NND4 320 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 TMEM14DPA8MWL7 114 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 NDUFA2O43678 99 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 MPIG6BO95866 241 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 IGHV2-70P01814 119 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 SNRPBP14678 240 aaKnown RBP12.32□□□□□ -0.44
CD48-203ENST00000613788 MGMTP16455 207 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 MDH2P40926 338 aaKnown RBP12.32□□□□□ -0.44
CD48-203ENST00000613788 QRFPP83859 136 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 HOXA4Q00056 320 aaPredicted RBP12.32□□□□□ -0.44
CD48-203ENST00000613788 CLEC12BQ2HXU8 276 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 NHLRC3Q5JS37 347 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 SHEQ5VZ18 495 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 MZT2AQ6P582 158 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 TMEM104Q8NE00 496 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 C19orf18Q8NEA5 215 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 C10orf105Q8TEF2 133 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 FAM46BQ96A09 425 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 PTX4Q96A99 478 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 FOXC2Q99958 501 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 URM1Q9BTM9 101 aaKnown RBP12.32□□□□□ -0.44
CD48-203ENST00000613788 TMEM59Q9BXS4 323 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 BANF2Q9H503 90 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 TMEM165Q9HC07 324 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 SPATA2Q9UM82 520 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 ST3GAL6Q9Y274 331 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 ETV7Q9Y603 341 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 IGHV3OR15-7A0A075B7D8 119 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 A0A0B4J203 849 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 TMEM272A0A1B0GTI8 110 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 A0A1W2PP11 408 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 ISPDA4D126 451 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 SH2D1BO14796 132 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 LDLRAD4O15165 306 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 PAHP00439 452 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 PSG2P11465 335 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 RAB6AP20340 208 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 ZNF146Q15072 292 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 ZNF404Q494X3 552 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 TMEM155Q4W5P6 130 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 AVPI1Q5T686 147 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 OR10K2Q6IF99 312 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 DNM1P46Q6ZS02 220 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 LINC00596Q86U02 117 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 OR5T2Q8NGG2 359 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 SEH1LQ96EE3 360 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 DCUN1D5Q9BTE7 237 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 SELENOIQ9C0D9 397 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 DNTTIP1Q9H147 329 aa12.32□□□□□ -0.44
CD48-203ENST00000613788 SEBOXQ9HB31 216 aaPredicted RBP12.32□□□□□ -0.44
CD48-203ENST00000613788 BAHCC1Q9P281 2608 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 TANC2Q9HCD6 1990 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 RFPL4AA6NLU0 287 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 RFPL4AL1F8VTS6 287 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 H3BUI4 141 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 PRDX2P32119 198 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 SNU13P55769 128 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms