RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 RFPL4AL1F8VTS6 287 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 DVL1O14640 695 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 TNFRSF13BO14836 293 aaPredicted RBP11.05□□□□□ -0.64
MDC1-209ENST00000613547 GPR37O15354 613 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 SIGLEC5O15389 551 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 PHF1O43189 567 aaPredicted RBP11.05□□□□□ -0.64
MDC1-209ENST00000613547 KDM4BO94953 1096 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 PRKACAP17612 351 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 SRMP19623 302 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 BCL3P20749 454 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 GALP22466 123 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 PRDX2P32119 198 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 PTGFRP43088 359 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 ZP1P60852 638 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 SEC61A1P61619 476 aaKnown RBP11.05□□□□□ -0.64
MDC1-209ENST00000613547 FABP5Q01469 135 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 IKZF1Q13422 519 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 RSU1Q15404 277 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 C11orf91Q3C1V1 193 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 SPIN3Q5JUX0 258 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 FAM27D1Q5T7N8 215 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 GLT8D1Q68CQ7 371 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 TMEM91Q6ZNR0 172 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 ZNF788Q6ZQV5 615 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 BATF2Q8N1L9 274 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 FAM216BQ8N7L0 139 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 OR4M2Q8NGB6 313 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 MUL1Q969V5 352 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 RBFOX1Q9NWB1 397 aaKnown RBP11.05□□□□□ -0.64
MDC1-209ENST00000613547 HIF1ANQ9NWT6 349 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 CTSZQ9UBR2 303 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 OR14J1Q9UGF5 321 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 TLN2Q9Y4G6 2542 aa11.05□□□□□ -0.64
MDC1-209ENST00000613547 TEP1Q99973 2627 aaKnown RBP11.04□□□□□ -0.64
MDC1-209ENST00000613547 PPIAL4CA0A0B4J2A2 164 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 IGKV1-12A0A0C4DH73 117 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 TRDV1A0A1B0GX56 115 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 ZNF780AO75290 641 aaPredicted RBP11.04□□□□□ -0.64
MDC1-209ENST00000613547 ECDO95905 644 aaPredicted RBP11.04□□□□□ -0.64
MDC1-209ENST00000613547 IGKV1D-12P01611 117 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 CSTBP04080 98 aaKnown RBP11.04□□□□□ -0.64
MDC1-209ENST00000613547 CHRM2P08172 466 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 HNF1AP20823 631 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 CALRP27797 417 aaKnown RBP11.04□□□□□ -0.64
MDC1-209ENST00000613547 OR3A4PP47883 348 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 NPBWR2P48146 333 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 MTNR1BP49286 362 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 CAPZA1P52907 286 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 GPR176Q14439 515 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 DCAF12L2Q5VW00 463 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 CD200R1LQ6Q8B3 271 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 BTNL3Q6UXE8 466 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 ZNF841Q6ZN19 808 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 RNF144BQ7Z419 303 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 ZNF561Q8N587 486 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 TMEM185AQ8NFB2 350 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 ST8SIA4Q92187 359 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 SDSLQ96GA7 329 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 GAFA1Q96PS6 74 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 UQCC2Q9BRT2 126 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 METTL9Q9H1A3 318 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 HMG20AQ9NP66 347 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 EXOSC4Q9NPD3 245 aaKnown RBP11.04□□□□□ -0.64
MDC1-209ENST00000613547 ZNF222Q9UK12 451 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 STUB1Q9UNE7 303 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 SSR3Q9UNL2 185 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 ING4Q9UNL4 249 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 MRPS28Q9Y2Q9 187 aaKnown RBP11.04□□□□□ -0.64
MDC1-209ENST00000613547 POLR3KQ9Y2Y1 108 aaPredicted RBP11.04□□□□□ -0.64
MDC1-209ENST00000613547 HIVEP2P31629 2446 aa11.04□□□□□ -0.64
MDC1-209ENST00000613547 LOC105371242A0A075B767 164 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 MAGEA13PA6NCF6 341 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 F8VVB4 439 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 F8VWA3 439 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 J3QLI3 93 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 SH2D1BO14796 132 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 ENSAO43768 121 aaKnown RBP11.03□□□□□ -0.64
MDC1-209ENST00000613547 SFTPBP07988 381 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 MYL9P24844 172 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 ZFP36P26651 326 aaKnown RBP11.03□□□□□ -0.64
MDC1-209ENST00000613547 RANBP1P43487 201 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 PSMD7P51665 324 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 GP2P55259 537 aaKnown RBP11.03□□□□□ -0.64
MDC1-209ENST00000613547 TIMM50Q3ZCQ8 353 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 AWAT2Q6E213 333 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 FAHD2BQ6P2I3 314 aaPredicted RBP11.03□□□□□ -0.64
MDC1-209ENST00000613547 CRIP3Q6Q6R5 217 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 ASCL4Q6XD76 172 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 Q71RC1 249 aaPredicted RBP11.03□□□□□ -0.64
MDC1-209ENST00000613547 TEX29Q8N6K0 151 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 CD177Q8N6Q3 437 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 RAB40AQ8WXH6 277 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 FAHD2AQ96GK7 314 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 SEBOXQ9HB31 216 aaPredicted RBP11.03□□□□□ -0.64
MDC1-209ENST00000613547 TMEM160Q9NX00 188 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 IL36GQ9NZH8 169 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 SLC25A10Q9UBX3 287 aaPredicted RBP11.03□□□□□ -0.64
MDC1-209ENST00000613547 GSTK1Q9Y2Q3 226 aa11.03□□□□□ -0.64
MDC1-209ENST00000613547 KIAA1324LA8MWY0 1029 aaPredicted RBP11.02□□□□□ -0.65
MDC1-209ENST00000613547 PDCD5O14737 125 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms