RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 XRCC2O43543 280 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 HEXBP07686 556 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 CSNK1A1P48729 337 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 ENDOGQ14249 297 aaKnown RBP19.48■□□□□ 0.71
SHANK2-220ENST00000608988 RSU1Q15404 277 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 CNN3Q15417 329 aaKnown RBP19.48■□□□□ 0.71
SHANK2-220ENST00000608988 DEFB133Q30KQ1 61 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 OR2B11Q5JQS5 317 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 OR14L1PQ8NHC6 308 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 PIGTQ969N2 578 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 SPTSSAQ969W0 71 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 ZNF501Q96CX3 271 aaPredicted RBP19.48■□□□□ 0.71
SHANK2-220ENST00000608988 POM121Q96HA1 1249 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 SLC25A31Q9H0C2 315 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 METTL7AQ9H8H3 244 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 ZNF286AQ9HBT8 521 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 PUS1Q9Y606 427 aaKnown RBP eCLIP19.48■□□□□ 0.71
SHANK2-220ENST00000608988 IGHV3-20A0A0C4DH32 117 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.48■□□□□ 0.71
SHANK2-220ENST00000608988 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.48■□□□□ 0.71
SHANK2-220ENST00000608988 SP6Q3SY56 376 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 DPPA3Q6W0C5 159 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 MR1Q95460 341 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 SPIN2AQ99865 258 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 SPIN2BQ9BPZ2 258 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 FAAP24Q9BTP7 215 aa19.48■□□□□ 0.71
SHANK2-220ENST00000608988 TRBV11-1A0A0K0K1C0 115 aa19.47■□□□□ 0.71
SHANK2-220ENST00000608988 FAM230AA0A1W2PPH8 454 aa19.47■□□□□ 0.71
SHANK2-220ENST00000608988 TGOLN2O43493 480 aa19.47■□□□□ 0.71
SHANK2-220ENST00000608988 C1QL1O75973 258 aa19.47■□□□□ 0.71
SHANK2-220ENST00000608988 RPS10P46783 165 aaKnown RBP19.47■□□□□ 0.71
SHANK2-220ENST00000608988 MTCP1P56278 107 aa19.47■□□□□ 0.71
SHANK2-220ENST00000608988 OR1D5P58170 312 aa19.47■□□□□ 0.71
SHANK2-220ENST00000608988 CLEC9AQ6UXN8 241 aa19.47■□□□□ 0.71
SHANK2-220ENST00000608988 RABEPKQ7Z6M1 372 aa19.47■□□□□ 0.71
SHANK2-220ENST00000608988 PPP1R3BQ86XI6 285 aa19.47■□□□□ 0.71
SHANK2-220ENST00000608988 OR2C3Q8N628 320 aa19.47■□□□□ 0.71
SHANK2-220ENST00000608988 ZNF610Q8N9Z0 462 aa19.47■□□□□ 0.71
SHANK2-220ENST00000608988 GAR1Q9NY12 217 aaKnown RBP19.47■□□□□ 0.71
SHANK2-220ENST00000608988 ELOA3CA0A087WX78 387 aaPredicted RBP19.46■□□□□ 0.71
SHANK2-220ENST00000608988 A0A1W2PNR3 127 aa19.46■□□□□ 0.71
SHANK2-220ENST00000608988 C5orf63A6NC05 138 aa19.46■□□□□ 0.71
SHANK2-220ENST00000608988 SEC14L6B5MCN3 397 aa19.46■□□□□ 0.71
SHANK2-220ENST00000608988 ZNF814B7Z6K7 855 aa19.46■□□□□ 0.71
SHANK2-220ENST00000608988 F5H5K5 113 aa19.46■□□□□ 0.71
SHANK2-220ENST00000608988 TERTO14746 1132 aaKnown RBP19.46■□□□□ 0.71
SHANK2-220ENST00000608988 HSPB1P04792 205 aaKnown RBP19.46■□□□□ 0.71
SHANK2-220ENST00000608988 MMP9P14780 707 aa19.46■□□□□ 0.71
SHANK2-220ENST00000608988 NHLH2Q02577 135 aa19.46■□□□□ 0.71
SHANK2-220ENST00000608988 NCMAPQ5T1S8 102 aa19.46■□□□□ 0.71
SHANK2-220ENST00000608988 FBXL14Q8N1E6 418 aa19.46■□□□□ 0.71
SHANK2-220ENST00000608988 OR52M1Q8NGK5 317 aa19.46■□□□□ 0.71
SHANK2-220ENST00000608988 INTS12Q96CB8 462 aaKnown RBP19.46■□□□□ 0.71
SHANK2-220ENST00000608988 GNPNAT1Q96EK6 184 aaPredicted RBP19.46■□□□□ 0.71
SHANK2-220ENST00000608988 IL36GQ9NZH8 169 aa19.46■□□□□ 0.71
SHANK2-220ENST00000608988 CHD9Q3L8U1 2897 aa19.46■□□□□ 0.71
SHANK2-220ENST00000608988 H3BQ15 152 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 M0R135 149 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 SRP19P09132 144 aaKnown RBP19.45■□□□□ 0.7
SHANK2-220ENST00000608988 CLDN17P56750 224 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 SP5Q6BEB4 398 aaPredicted RBP19.45■□□□□ 0.7
SHANK2-220ENST00000608988 RHBDD2Q6NTF9 364 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 OR2G3Q8NGZ4 309 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 ZNF799Q96GE5 643 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 PLEKHF2Q9H8W4 249 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 FGF21Q9NSA1 209 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 NXT1Q9UKK6 140 aaKnown RBP19.45■□□□□ 0.7
SHANK2-220ENST00000608988 ZNF732B4DXR9 585 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 ZNF506Q5JVG8 444 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 SPSB3Q6PJ21 355 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 LHFPL2Q6ZUX7 228 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 C7orf61Q8IZ16 206 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 FADS6Q8N9I5 356 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 OR10G4Q8NGN3 311 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 THAP3Q8WTV1 239 aaPredicted RBP19.45■□□□□ 0.7
SHANK2-220ENST00000608988 NABP1Q96AH0 204 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 RBMXL1Q96E39 390 aaKnown RBP19.45■□□□□ 0.7
SHANK2-220ENST00000608988 PLSCR2Q9NRY7 297 aa19.45■□□□□ 0.7
SHANK2-220ENST00000608988 RP1P56715 2156 aa19.44■□□□□ 0.7
SHANK2-220ENST00000608988 A0A087WZY1 265 aa19.44■□□□□ 0.7
SHANK2-220ENST00000608988 DUXBA0A1W2PPF3 345 aa19.44■□□□□ 0.7
SHANK2-220ENST00000608988 EPOPA6NHQ4 379 aa19.44■□□□□ 0.7
SHANK2-220ENST00000608988 B4DEV8 164 aa19.44■□□□□ 0.7
SHANK2-220ENST00000608988 HSD17B6O14756 317 aa19.44■□□□□ 0.7
SHANK2-220ENST00000608988 ZFAND5O76080 213 aa19.44■□□□□ 0.7
SHANK2-220ENST00000608988 HBE1P02100 147 aa19.44■□□□□ 0.7
SHANK2-220ENST00000608988 UBE2KP61086 200 aa19.44■□□□□ 0.7
SHANK2-220ENST00000608988 HERV-K104P61576 105 aa19.44■□□□□ 0.7
SHANK2-220ENST00000608988 CFHR1Q03591 330 aa19.44■□□□□ 0.7
SHANK2-220ENST00000608988 SHBQ15464 509 aa19.44■□□□□ 0.7
SHANK2-220ENST00000608988 ZNF574Q6ZN55 896 aaPredicted RBP19.44■□□□□ 0.7
SHANK2-220ENST00000608988 SLC35E3Q7Z769 313 aa19.44■□□□□ 0.7
SHANK2-220ENST00000608988 AKR7LQ8NHP1 331 aa19.44■□□□□ 0.7
SHANK2-220ENST00000608988 RAB39BQ96DA2 213 aa19.44■□□□□ 0.7
SHANK2-220ENST00000608988 LAMA2P24043 3122 aaKnown RBP19.44■□□□□ 0.7
SHANK2-220ENST00000608988 IGHV1OR15-9A0A0B4J2B8 117 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 OR5H15A6NDH6 313 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 TRDCB7Z8K6 153 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 VAMP5O95183 116 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 EN2P19622 333 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms