RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, human

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBE1-209	ENST00000604814	ZNF774	Q6NX45	483 aa		4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	DGAT2L6	Q6ZPD8	337 aa		4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	C1QL2	Q7Z5L3	287 aa		4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	C17orf82	Q86X59	251 aa	Predicted RBP	4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	STX19	Q8N4C7	294 aa		4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	NUP37	Q8NFH4	326 aa		4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	OR10G9	Q8NGN4	311 aa		4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	OR10J6P	Q8NGY7	276 aa		4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	OR10A6	Q8NH74	314 aa		4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	ZNF519	Q8TB69	540 aa		4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	SRSF12	Q8WXF0	261 aa	Known RBP	4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	RGP1	Q92546	391 aa	Predicted RBP	4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	VOPP1	Q96AW1	172 aa		4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	SUCNR1	Q9BXA5	334 aa		4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	SRMS	Q9H3Y6	488 aa		4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	GSKIP	Q9P0R6	139 aa		4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	ZNF629	Q9UEG4	869 aa	Predicted RBP	4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	UGT2A1	Q9Y4X1	527 aa		4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	GREB1L	Q9C091	1923 aa	Predicted RBP	4.21	□□□□□ -1.74
TUBE1-209	ENST00000604814	TRAV8-6	A0A0B4J262	113 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	FAM159B	A6NKW6	160 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	NPIPB7	O75200	414 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	OR7C1	O76099	320 aa	Predicted RBP	4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	CD48	P09326	243 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	TFPT	P0C1Z6	253 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	ESD	P10768	282 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	LAMP1	P11279	417 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	SPN	P16150	400 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	LGALS7	P47929	136 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	LAMTOR4	Q0VGL1	99 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	FZD2	Q14332	565 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	LCN12	Q6JVE5	192 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	UNQ9370/PRO34162	Q6UXP9	181 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	NAA40	Q86UY6	237 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	SLC22A18AS	Q8N1D0	253 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	ZNF561	Q8N587	486 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	FAM71E2	Q8N5Q1	922 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	NATD1	Q8N6N6	113 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	OR4X1	Q8NH49	305 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	GEMIN6	Q8WXD5	167 aa	Known RBP	4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	LZIC	Q8WZA0	190 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	TAMM41	Q96BW9	452 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	HAUS1	Q96CS2	278 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	TBX5	Q99593	518 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	ISG20L2	Q9H9L3	353 aa	Known RBP	4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	RRAGD	Q9NQL2	400 aa	Predicted RBP	4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	SLC35A3	Q9Y2D2	325 aa		4.2	□□□□□ -1.74
TUBE1-209	ENST00000604814	IGHV1OR15-1	A0A075B7D0	117 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	SMIM1	B2RUZ4	78 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814		I3L4J1	428 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	MANBA	O00462	879 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	SLC31A2	O15432	143 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	CSF3	P09919	207 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	CXCL3	P19876	107 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	SLC6A1	P30531	599 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	IL2RG	P31785	369 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	TCTA	P57738	103 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	AP1S1	P61966	158 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	PRR3	P79522	188 aa	Known RBP	4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	ZNF684	Q5T5D7	378 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	CXCL17	Q6UXB2	119 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	FAM220A	Q7Z4H9	259 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	GALNT10	Q86SR1	603 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	CALHM3	Q86XJ0	350 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	CATSPER3	Q86XQ3	398 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	CIART	Q8N365	385 aa	Predicted RBP	4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	NRAC	Q8N912	160 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	OR51S1	Q8NGJ8	323 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	GRPEL2	Q8TAA5	225 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	RTBDN	Q9BSG5	229 aa	Predicted RBP	4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	OCR1	Q9BZK8	76 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	ALX4	Q9H161	411 aa	Predicted RBP	4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	PANK3	Q9H999	370 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	TMEM138	Q9NPI0	162 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	TAS2R5	Q9NYW4	299 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	THAP10	Q9P2Z0	257 aa	Predicted RBP	4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	TRMT112	Q9UI30	125 aa	Known RBP	4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	TRAV8-2	A0A0B4J237	113 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	OR4C46	A6NHA9	309 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814		H0Y9J4	135 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	ATG12	O94817	140 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	ALPL	P05186	524 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	SERPINA7	P05543	415 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	OR13C7	P0DN81	318 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	SNHG28	P0DPA3	235 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	PSMB1	P20618	241 aa	Known RBP	4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	HIST1H1T	P22492	207 aa	Predicted RBP	4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	GZMM	P51124	257 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	TAS2R46	P59540	309 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	RAB5B	P61020	215 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	ESRRG	P62508	458 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	INCA1	Q0VD86	236 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	ZNF718	Q3SXZ3	478 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	GDPGP1	Q6ZNW5	385 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	SLC35F6	Q8N357	371 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	EIF4E3	Q8N5X7	224 aa	Known RBP	4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	C11orf72	Q8NBR9	251 aa		4.19	□□□□□ -1.74
TUBE1-209	ENST00000604814	OR1N2	Q8NGR9	330 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms