RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	TK1	P04183	234 aa		12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	CCDC159	P0C7I6	412 aa		12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	POU3F4	P49335	361 aa		12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	ETV1	P50549	477 aa		12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	GBX2	P52951	348 aa	Predicted RBP	12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	MTCP1	P56278	107 aa		12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	RPL31	P62899	125 aa	Known RBP	12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	GUCA2A	Q02747	115 aa		12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	COL10A1	Q03692	680 aa		12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	FOXL1	Q12952	345 aa		12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	OGFRL1	Q5TC84	451 aa	Predicted RBP	12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	LHFPL2	Q6ZUX7	228 aa		12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	RNF144B	Q7Z419	303 aa		12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	LDLRAD3	Q86YD5	345 aa		12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	DHRSX	Q8N5I4	330 aa		12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	OR13C9	Q8NGT0	318 aa		12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	OPALIN	Q96PE5	141 aa		12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	PDCD1LG2	Q9BQ51	273 aa		12.68	□□□□□ -0.38
PLD3-223	ENST00000600948	FAM234A	Q9H0X4	552 aa		12.68	□□□□□ -0.38
PLD3-223	ENST00000600948		K7N7A8	449 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	NPFF	O15130	113 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	ZNF737	O75373	536 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	DCK	P27707	260 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	NPBWR2	P48146	333 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	BLMH	Q13867	455 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	NCR3LG1	Q68D85	454 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	TMEM200B	Q69YZ2	307 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	HCP5	Q6MZN7	132 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	CRIP3	Q6Q6R5	217 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	MKX	Q8IYA7	352 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948		Q8IYB0	196 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	TMEM86B	Q8N661	226 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	C3orf56	Q8N813	242 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	ASCC1	Q8N9N2	400 aa	Known RBP	12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	SETD9	Q8NE22	299 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	OR4M1	Q8NGD0	313 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	OR5AK2	Q8NH90	309 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	RPS4Y2	Q8TD47	263 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	HAVCR2	Q8TDQ0	301 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	SSMEM1	Q8WWF3	244 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	TAF15	Q92804	592 aa	Known RBP eCLIP	12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	EMG1	Q92979	244 aa	Known RBP	12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	RFT1	Q96AA3	541 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	SPACA5	Q96QH8	159 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	COMMD4	Q9H0A8	199 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	ZCCHC4	Q9H5U6	513 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	SEBOX	Q9HB31	216 aa	Predicted RBP	12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	TNFRSF19	Q9NS68	423 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	RBFOX1	Q9NWB1	397 aa	Known RBP	12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	IL36RN	Q9UBH0	155 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	CAB39	Q9Y376	341 aa	Predicted RBP	12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	POMT1	Q9Y6A1	747 aa		12.67	□□□□□ -0.38
PLD3-223	ENST00000600948	TRBV2	A0A0J9YWF9	115 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948		A0A1W2PRD5	423 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948		A0A1W2PRF3	423 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948		A0A1W2PRM7	423 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	IRGM	A1A4Y4	181 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948		H0YAE9	185 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	SPRY1	O43609	319 aa	Predicted RBP	12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	CHRM2	P08172	466 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	RPSA	P08865	295 aa	Known RBP	12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	BCL3	P20749	454 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	EEF1B2	P24534	225 aa	Known RBP	12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	UBE2E1	P51965	193 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	GTF2A1	P52655	376 aa	Predicted RBP	12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	PDZK1IP1	Q13113	114 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	IL18R1	Q13478	541 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	ZNF273	Q14593	569 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	OR2G6	Q5TZ20	316 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	XAF1	Q6GPH4	301 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	FAM58A	Q8N1B3	248 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	PNKD	Q8N490	385 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	C11orf42	Q8N5U0	333 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	PARP16	Q8N5Y8	322 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	OR5D13	Q8NGL4	314 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	RGP1	Q92546	391 aa	Predicted RBP	12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	CHIA	Q9BZP6	476 aa		12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	DIMT1	Q9UNQ2	313 aa	Known RBP	12.66	□□□□□ -0.38
PLD3-223	ENST00000600948	IGKV1-12	A0A0C4DH73	117 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	TMEM82	A0PJX8	343 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	FAM181B	A6NEQ2	426 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	ANGPTL7	O43827	346 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	ALX3	O95076	343 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	HAND1	O96004	215 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	CYB5A	P00167	134 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	IGKV1D-12	P01611	117 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	IGHV4-59	P01825	116 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	FBP1	P09467	338 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	OCM2	P0CE71	109 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	OCM	P0CE72	109 aa	Predicted RBP	12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	CCL3L1	P16619	93 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	SAA4	P35542	130 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	CAPG	P40121	348 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	IER3	P46695	156 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	ACSM1	Q08AH1	577 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	CDK5R1	Q15078	307 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	FIP1L1	Q6UN15	594 aa	Known RBP	12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	C17orf107	Q6ZR85	190 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	OR8H2	Q8N162	312 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	TBC1D15	Q8TC07	691 aa		12.65	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms