RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 MT-ND2P03891 347 aa23.26■■□□□ 1.31
SSBP4-206ENST00000599699 MMP9P14780 707 aa23.26■■□□□ 1.31
SSBP4-206ENST00000599699 HILS1P60008 231 aa23.26■■□□□ 1.31
SSBP4-206ENST00000599699 SIGLECL1Q8N7X8 197 aa23.26■■□□□ 1.31
SSBP4-206ENST00000599699 RGP1Q92546 391 aaPredicted RBP23.26■■□□□ 1.31
SSBP4-206ENST00000599699 EMG1Q92979 244 aaKnown RBP23.26■■□□□ 1.31
SSBP4-206ENST00000599699 SMIM19Q96E16 107 aa23.26■■□□□ 1.31
SSBP4-206ENST00000599699 TBX15Q96SF7 602 aa23.26■■□□□ 1.31
SSBP4-206ENST00000599699 SIRPDQ9H106 197 aa23.26■■□□□ 1.31
SSBP4-206ENST00000599699 KPTNQ9Y664 436 aa23.26■■□□□ 1.31
SSBP4-206ENST00000599699 OGG1O15527 345 aa23.25■■□□□ 1.31
SSBP4-206ENST00000599699 SULT1B1O43704 296 aa23.25■■□□□ 1.31
SSBP4-206ENST00000599699 LALBAP00709 142 aa23.25■■□□□ 1.31
SSBP4-206ENST00000599699 CD2P06729 351 aa23.25■■□□□ 1.31
SSBP4-206ENST00000599699 C21orf33P30042 268 aaPredicted RBP23.25■■□□□ 1.31
SSBP4-206ENST00000599699 PDZK1IP1Q13113 114 aa23.25■■□□□ 1.31
SSBP4-206ENST00000599699 PDCD1Q15116 288 aa23.25■■□□□ 1.31
SSBP4-206ENST00000599699 C6orf141Q5SZD1 244 aa23.25■■□□□ 1.31
SSBP4-206ENST00000599699 BRD3OSQ6XYD6 125 aa23.25■■□□□ 1.31
SSBP4-206ENST00000599699 PHC2Q8IXK0 858 aa23.25■■□□□ 1.31
SSBP4-206ENST00000599699 Q8IYB0 196 aa23.25■■□□□ 1.31
SSBP4-206ENST00000599699 ZFP41Q8N8Y5 198 aa23.25■■□□□ 1.31
SSBP4-206ENST00000599699 C19orf24Q9BVV8 132 aa23.25■■□□□ 1.31
SSBP4-206ENST00000599699 SCN3BQ9NY72 215 aa23.25■■□□□ 1.31
SSBP4-206ENST00000599699 ZNF281Q9Y2X9 895 aa23.25■■□□□ 1.31
SSBP4-206ENST00000599699 PTGES3LE9PB15 166 aa23.24■■□□□ 1.31
SSBP4-206ENST00000599699 BCL3P20749 454 aa23.24■■□□□ 1.31
SSBP4-206ENST00000599699 FIP1L1Q6UN15 594 aaKnown RBP23.24■■□□□ 1.31
SSBP4-206ENST00000599699 IZUMO2Q6UXV1 221 aa23.24■■□□□ 1.31
SSBP4-206ENST00000599699 OR5D18Q8NGL1 313 aa23.24■■□□□ 1.31
SSBP4-206ENST00000599699 C8orf46Q8TAG6 207 aa23.24■■□□□ 1.31
SSBP4-206ENST00000599699 RPS4Y2Q8TD47 263 aa23.24■■□□□ 1.31
SSBP4-206ENST00000599699 LHX4Q969G2 390 aa23.24■■□□□ 1.31
SSBP4-206ENST00000599699 ANGPTL7O43827 346 aa23.23■■□□□ 1.31
SSBP4-206ENST00000599699 RAB3AP20336 220 aa23.23■■□□□ 1.31
SSBP4-206ENST00000599699 NPBWR2P48146 333 aa23.23■■□□□ 1.31
SSBP4-206ENST00000599699 VMO1Q7Z5L0 202 aa23.23■■□□□ 1.31
SSBP4-206ENST00000599699 FAM185AQ8N0U4 392 aa23.23■■□□□ 1.31
SSBP4-206ENST00000599699 ASCC1Q8N9N2 400 aaKnown RBP23.23■■□□□ 1.31
SSBP4-206ENST00000599699 GHSRQ92847 366 aa23.23■■□□□ 1.31
SSBP4-206ENST00000599699 DMRTB1Q96MA1 342 aa23.23■■□□□ 1.31
SSBP4-206ENST00000599699 RBFOX1Q9NWB1 397 aaKnown RBP23.23■■□□□ 1.31
SSBP4-206ENST00000599699 FKBP14Q9NWM8 211 aa23.23■■□□□ 1.31
SSBP4-206ENST00000599699 ERGIC3Q9Y282 383 aa23.23■■□□□ 1.31
SSBP4-206ENST00000599699 TRBV23-1A0A0A0MS06 115 aa23.22■■□□□ 1.31
SSBP4-206ENST00000599699 PNMA8CA0A1B0GUJ8 204 aa23.22■■□□□ 1.31
SSBP4-206ENST00000599699 MAGEB3O15480 346 aa23.22■■□□□ 1.31
SSBP4-206ENST00000599699 ATP6V1G2O95670 118 aa23.22■■□□□ 1.31
SSBP4-206ENST00000599699 CALCBP10092 127 aa23.22■■□□□ 1.31
SSBP4-206ENST00000599699 TAS2R43P59537 309 aa23.22■■□□□ 1.31
SSBP4-206ENST00000599699 COL10A1Q03692 680 aa23.22■■□□□ 1.31
SSBP4-206ENST00000599699 DMKNQ6E0U4 476 aaPredicted RBP23.22■■□□□ 1.31
SSBP4-206ENST00000599699 RNF144BQ7Z419 303 aa23.22■■□□□ 1.31
SSBP4-206ENST00000599699 FAM58AQ8N1B3 248 aa23.22■■□□□ 1.31
SSBP4-206ENST00000599699 KIR3DL3Q8N743 410 aa23.22■■□□□ 1.31
SSBP4-206ENST00000599699 ZNF485Q8NCK3 441 aa23.22■■□□□ 1.31
SSBP4-206ENST00000599699 MYDGFQ969H8 173 aa23.22■■□□□ 1.31
SSBP4-206ENST00000599699 TMEM106AQ96A25 262 aa23.22■■□□□ 1.31
SSBP4-206ENST00000599699 TAS2R4Q9NYW5 299 aa23.22■■□□□ 1.31
SSBP4-206ENST00000599699 SOX21Q9Y651 276 aaPredicted RBP23.22■■□□□ 1.31
SSBP4-206ENST00000599699 TRIM77I1YAP6 450 aa23.21■■□□□ 1.31
SSBP4-206ENST00000599699 ALX3O95076 343 aa23.21■■□□□ 1.31
SSBP4-206ENST00000599699 CHRM2P08172 466 aa23.21■■□□□ 1.31
SSBP4-206ENST00000599699 TMEM225BP0DP42 221 aa23.21■■□□□ 1.31
SSBP4-206ENST00000599699 PRKACAP17612 351 aa23.21■■□□□ 1.31
SSBP4-206ENST00000599699 MYF6P23409 242 aa23.21■■□□□ 1.31
SSBP4-206ENST00000599699 HSPA13P48723 471 aa23.21■■□□□ 1.31
SSBP4-206ENST00000599699 SNU13P55769 128 aaKnown RBP23.21■■□□□ 1.31
SSBP4-206ENST00000599699 WNT4P56705 351 aa23.21■■□□□ 1.31
SSBP4-206ENST00000599699 BPIFB3P59826 476 aa23.21■■□□□ 1.31
SSBP4-206ENST00000599699 KISS1Q15726 138 aa23.21■■□□□ 1.31
SSBP4-206ENST00000599699 RUSC1-AS1Q66K80 236 aa23.21■■□□□ 1.31
SSBP4-206ENST00000599699 C9orf139Q6ZV77 190 aa23.21■■□□□ 1.31
SSBP4-206ENST00000599699 PDZD9Q8IXQ8 264 aa23.21■■□□□ 1.31
SSBP4-206ENST00000599699 CENPVL3A0A0U1RRI6 287 aa23.2■■□□□ 1.3
SSBP4-206ENST00000599699 TK1P04183 234 aa23.2■■□□□ 1.3
SSBP4-206ENST00000599699 CDK1P06493 297 aa23.2■■□□□ 1.3
SSBP4-206ENST00000599699 BLMHQ13867 455 aa23.2■■□□□ 1.3
SSBP4-206ENST00000599699 SATL1Q86VE3 508 aa23.2■■□□□ 1.3
SSBP4-206ENST00000599699 NANOGP1Q8N7R0 232 aa23.2■■□□□ 1.3
SSBP4-206ENST00000599699 OR4M1Q8NGD0 313 aa23.2■■□□□ 1.3
SSBP4-206ENST00000599699 OR13C5Q8NGS8 318 aa23.2■■□□□ 1.3
SSBP4-206ENST00000599699 CPNE2Q96FN4 548 aaPredicted RBP23.2■■□□□ 1.3
SSBP4-206ENST00000599699 ANKRD60Q9BZ19 345 aa23.2■■□□□ 1.3
SSBP4-206ENST00000599699 SIRT7Q9NRC8 400 aa23.2■■□□□ 1.3
SSBP4-206ENST00000599699 IL36RNQ9UBH0 155 aa23.2■■□□□ 1.3
SSBP4-206ENST00000599699 GLS2Q9UI32 602 aa23.2■■□□□ 1.3
SSBP4-206ENST00000599699 HAND1O96004 215 aa23.19■■□□□ 1.3
SSBP4-206ENST00000599699 DUSP1P28562 367 aa23.19■■□□□ 1.3
SSBP4-206ENST00000599699 RPL31P62899 125 aaKnown RBP23.19■■□□□ 1.3
SSBP4-206ENST00000599699 PPP3R1P63098 170 aa23.19■■□□□ 1.3
SSBP4-206ENST00000599699 BAMBIQ13145 260 aa23.19■■□□□ 1.3
SSBP4-206ENST00000599699 RIPK1Q13546 671 aa23.19■■□□□ 1.3
SSBP4-206ENST00000599699 SPATA3Q8NHX4 192 aa23.19■■□□□ 1.3
SSBP4-206ENST00000599699 ZNF48Q96MX3 618 aaPredicted RBP23.19■■□□□ 1.3
SSBP4-206ENST00000599699 GPER1Q99527 375 aa23.19■■□□□ 1.3
SSBP4-206ENST00000599699 FAM234AQ9H0X4 552 aa23.19■■□□□ 1.3
SSBP4-206ENST00000599699 ESM1Q9NQ30 184 aa23.19■■□□□ 1.3
SSBP4-206ENST00000599699 C19orf12Q9NSK7 152 aa23.19■■□□□ 1.3
SSBP4-206ENST00000599699 IGHV1-69DA0A0B4J2H0 117 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms