RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 F8VVB4 439 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 F8VWA3 439 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 H3BUI4 141 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 SDCBPO00560 298 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 GIPP09681 153 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 DCAF12L2Q5VW00 463 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 SLC25A42Q86VD7 318 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 CCDC36Q8IYA8 594 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 ZNF610Q8N9Z0 462 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 WDR31Q8NA23 367 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 ZSCAN4Q8NAM6 433 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 ADAD2Q8NCV1 583 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 OR5L1Q8NGL2 311 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 TERB2Q8NHR7 220 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 MARCH1Q8TCQ1 289 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 SLAMF9Q96A28 289 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 STARD4Q96DR4 205 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 MRPS24Q96EL2 167 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 CCDC120Q96HB5 630 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 HS3ST6Q96QI5 342 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 OPN3Q9H1Y3 402 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 INTS1Q8N201 2190 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 GOSR2O14653 212 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 SMPD2O60906 423 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 AGFG2O95081 481 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 CGAP01215 116 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 BCL3P20749 454 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 RBM11P57052 281 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 ERVS71-1P61550 626 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 PPA1Q15181 289 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 IGFBP7Q16270 282 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 FTMTQ8N4E7 242 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 RPRMLQ8N4K4 120 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 ARRDC1Q8N5I2 433 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 OR5P3Q8WZ94 311 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 GPR137Q96N19 417 aa14.61□□□□□ -0.07
SHKBP1-216ENST00000598201 MBD3L4A6NDZ8 208 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-216ENST00000598201 MBD3L3A6NE82 208 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-216ENST00000598201 MBD3L5A6NJ08 208 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-216ENST00000598201 ZBTB25P24278 435 aa14.6□□□□□ -0.07
SHKBP1-216ENST00000598201 PER3P56645 1201 aa14.6□□□□□ -0.07
SHKBP1-216ENST00000598201 PPP1R1AQ13522 171 aa14.6□□□□□ -0.07
SHKBP1-216ENST00000598201 C12orf45Q8N5I9 185 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-216ENST00000598201 Q8NFD4 153 aa14.6□□□□□ -0.07
SHKBP1-216ENST00000598201 OR13G1Q8NGZ3 307 aa14.6□□□□□ -0.07
SHKBP1-216ENST00000598201 MBD3L2Q8NHZ7 208 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-216ENST00000598201 SLA2Q9H6Q3 261 aa14.6□□□□□ -0.07
SHKBP1-216ENST00000598201 PRR14LQ5THK1 2151 aa14.6□□□□□ -0.07
SHKBP1-216ENST00000598201 ANKRD30BLA7E2S9 258 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 ZNF35P13682 527 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 OR3A3P47888 321 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 NPY4RP50391 375 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 TSPAN5P62079 268 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 CXorf67Q86X51 503 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 OR5AP2Q8NGF4 316 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 OR5A2Q8NGI9 324 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 OR2J1Q9GZK6 312 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 CDH20Q9HBT6 801 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 MTCH1Q9NZJ7 389 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 FAM215AQ9Y5M1 114 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 ATXN7O15265 892 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 HLA-AP01891 365 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 CA6P23280 308 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 TAS2R46P59540 309 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 RAP2BP61225 183 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 PPP1CBP62140 327 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 C6orf183Q5T699 404 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 FBXW12Q6X9E4 464 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 OVCH2Q7RTZ1 564 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 BOD1Q96IK1 185 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 EHFQ9NZC4 300 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 PROCRQ9UNN8 238 aa14.59□□□□□ -0.07
SHKBP1-216ENST00000598201 ATRXP46100 2492 aa14.58□□□□□ -0.07
SHKBP1-216ENST00000598201 KMT2BQ9UMN6 2715 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 FAM221AA4D161 298 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 SYNGR1O43759 233 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 WDR1O75083 606 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 SLC22A5O76082 557 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 CBR1P16152 277 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 OPRM1P35372 400 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 KLRB1Q12918 225 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 LGALSLQ3ZCW2 172 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 CHRFAM7AQ494W8 412 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 AADACL3Q5VUY0 350 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 LHFPL1Q86WI0 220 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 C1orf162Q8NEQ5 155 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 HIST1H2AAQ96QV6 131 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 CMSS1Q9BQ75 279 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 GON7Q9BXV9 100 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 PCDHB16Q9NRJ7 776 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 IL36RNQ9UBH0 155 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 OPN4Q9UHM6 478 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 OSGIN2Q9Y236 505 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 MPC1Q9Y5U8 109 aa14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 TLN1Q9Y490 2541 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-216ENST00000598201 C9orf170A2RU37 121 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 CEACAM18A8MTB9 384 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 PDCD6O75340 191 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 IL2RAP01589 272 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 IGKV3-15P01624 115 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms