RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 RFPL4AL1F8VTS6 287 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 J3QLI3 93 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 ANGPTL7O43827 346 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 CRLF1O75462 422 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 TMEM225BP0DP42 221 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 AMY2BP19961 511 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 BCL3P20749 454 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 TGFBR2P37173 567 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 TPBGQ13641 420 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 LRRC10Q5BKY1 277 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 DDI2Q5TDH0 399 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 CD276Q5ZPR3 534 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 FIP1L1Q6UN15 594 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 OR52N4Q8NGI2 321 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 LRRC42Q9Y546 428 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 IGHV2-70DA0A0C4DH43 119 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 F8VVB4 439 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 F8VWA3 439 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 SIGLEC5O15389 551 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 GPX5O75715 221 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 KNG1P01042 644 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 ALDOBP05062 364 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 SELLP14151 372 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 CPEP16870 476 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 IGFBP3P17936 291 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 FSTP19883 344 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 NPBWR2P48146 333 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 EMX1Q04741 257 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 ACSM3Q53FZ2 586 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 BTNL3Q6UXE8 466 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 SAXO1Q8IYX7 474 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 RAB40AQ8WXH6 277 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 NUDT16L1Q9BRJ7 211 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 C7orf69Q9H7B7 122 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 NOX4Q9NPH5 578 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 ZNF222Q9UK12 451 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 FOXJ3Q9UPW0 622 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 INSIG2Q9Y5U4 225 aa16.33■□□□□ 0.2
SHKBP1-214ENST00000597396 TRAV8-7A0A075B6U6 113 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 ENSAO43768 121 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 PRKACAP17612 351 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 PRDX2P32119 198 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 SRP14P37108 136 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 CEBPDP49716 269 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 CAPZA1P52907 286 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 ZP1P60852 638 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 TRAM1Q15629 374 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 CRIP3Q6Q6R5 217 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 SPARTQ8N0X7 666 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 FAM58AQ8N1B3 248 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 FGFRL1Q8N441 504 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 CD177Q8N6Q3 437 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 PNLDC1Q8NA58 520 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 ZSCAN4Q8NAM6 433 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 TMEM185AQ8NFB2 350 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 TNFAIP8L1Q8WVP5 186 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 TMEM203Q969S6 136 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 SDSLQ96GA7 329 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 MRI1Q9BV20 369 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 TMPRSS13Q9BYE2 586 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 FAM192AQ9GZU8 254 aa16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 RBFOX1Q9NWB1 397 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 SLC25A10Q9UBX3 287 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-214ENST00000597396 IGKV1-12A0A0C4DH73 117 aa16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 C22orf46C9J442 243 aa16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 GABRPO00591 440 aa16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 PIN1P1O15428 100 aa16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 ECDO95905 644 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 IGKV1D-12P01611 117 aa16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 MAS1P04201 325 aa16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 NDUFB7P17568 137 aa16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 ZNF93P35789 620 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 SNU13P55769 128 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 RPS25P62851 125 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 INSL4Q14641 139 aa16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 DGUOKQ16854 277 aa16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 ARMCX4Q5H9R4 360 aa16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 ZNF773Q6PK81 442 aa16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 UNQ9370/PRO34162Q6UXP9 181 aa16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 BTN2A1Q7KYR7 527 aa16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 TEX29Q8N6K0 151 aa16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 H1FXQ92522 213 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 MDFIQ99750 246 aa16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 ELL3Q9HB65 397 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 MAB21L2Q9Y586 359 aa16.31■□□□□ 0.2
SHKBP1-214ENST00000597396 GPR37O15354 613 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 FCN3O75636 299 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 KDM4BO94953 1096 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 CALCBP10092 127 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 SRD5A1P18405 259 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 PSMA1P25786 263 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 PAX2Q02962 417 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 C11orf91Q3C1V1 193 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 KCTD21Q4G0X4 260 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 CEACAM19Q7Z692 300 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 PHC2Q8IXK0 858 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 ZNF561Q8N587 486 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 ZNRF1Q8ND25 227 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 PXT1Q8NFP0 134 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 FCGR1BQ92637 280 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms