RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 NXF2Q9GZY0 626 aaKnown RBP12.58□□□□□ -0.4
TRIM28-207ENST00000597136 MXRA5Q9NR99 2828 aa12.58□□□□□ -0.4
TRIM28-207ENST00000597136 FN1P02751 2386 aaKnown RBP12.58□□□□□ -0.4
TRIM28-207ENST00000597136 KIAA2026Q5HYC2 2103 aa12.58□□□□□ -0.4
TRIM28-207ENST00000597136 IGKV1-12A0A0C4DH73 117 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 A6NLC8 198 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 RHBDL1O75783 438 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 BPNT1O95861 308 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 PAHP00439 452 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 IGKV1D-12P01611 117 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 CALCBP10092 127 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 SNRPBP14678 240 aaKnown RBP12.57□□□□□ -0.4
TRIM28-207ENST00000597136 FOSL1P15407 271 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 ARSBP15848 533 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 RANBP1P43487 201 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 KRTAP1-1Q07627 177 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 ZMYND11Q15326 602 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 C2orf76Q3KRA6 126 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 ZNF404Q494X3 552 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 Q71RC1 249 aaPredicted RBP12.57□□□□□ -0.4
TRIM28-207ENST00000597136 MKXQ8IYA7 352 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 CLDND2Q8NHS1 167 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 ZNF671Q8TAW3 534 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 ACOT12Q8WYK0 555 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 AP3S1Q92572 193 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 FN3KRPQ9HA64 309 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 C1orf123Q9NWV4 160 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 MTCH1Q9NZJ7 389 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 ABRACLQ9P1F3 81 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 OR5V1Q9UGF6 321 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 ING4Q9UNL4 249 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 NPTNQ9Y639 398 aa12.57□□□□□ -0.4
TRIM28-207ENST00000597136 LY6G6DO95868 133 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 CYB5AP00167 134 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 UBBP0CG47 229 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 CAPZA1P52907 286 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 QRFPP83859 136 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 DYNC1I2Q13409 638 aaKnown RBP12.56□□□□□ -0.4
TRIM28-207ENST00000597136 WDR82Q6UXN9 313 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 BOLLQ8N9W6 283 aaKnown RBP12.56□□□□□ -0.4
TRIM28-207ENST00000597136 MCFD2Q8NI22 146 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 LGALS14Q8TCE9 139 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 RAB1CQ92928 201 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 ERGIC1Q969X5 290 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 SLAMF9Q96A28 289 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 S100A13Q99584 98 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 MRI1Q9BV20 369 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 METTL9Q9H1A3 318 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 KCNK15Q9H427 330 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 ELL3Q9HB65 397 aaPredicted RBP12.56□□□□□ -0.4
TRIM28-207ENST00000597136 PTTG2Q9NZH5 202 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 GHRLQ9UBU3 117 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 POLDIP2Q9Y2S7 368 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 A3GALT2U3KPV4 340 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 A0A075B6Q4 140 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 IGHV2-70P01814 119 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 ACAA1P09110 424 aaPredicted RBP12.56□□□□□ -0.4
TRIM28-207ENST00000597136 VSIG8P0DPA2 414 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 CFHR2P36980 270 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 SCAND1P57086 179 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 LMO4P61968 165 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 RSU1Q15404 277 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 TMEM249Q2WGJ8 235 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 SLC22A6Q4U2R8 563 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 MZT2AQ6P582 158 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 OR5H6Q8NGV6 325 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 OR10K1Q8NGX5 313 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 Q8TCH9 128 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 SMURF1Q9HCE7 757 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 IL36GQ9NZH8 169 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 COMMD3Q9UBI1 195 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 SPATA2Q9UM82 520 aa12.56□□□□□ -0.4
TRIM28-207ENST00000597136 TMEM272A0A1B0GTI8 110 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 hCG_1807616A0A1W2PRN6 198 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 TMEM14DPA8MWL7 114 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 F8VVB4 439 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 F8VWA3 439 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 TRAPPC2LH3BP13 241 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 LDLRAD4O15165 306 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 NOS1APO75052 506 aaPredicted RBP12.55□□□□□ -0.4
TRIM28-207ENST00000597136 KDM4BO94953 1096 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 SFTPBP07988 381 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 PGA5P0DJD9 388 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 BCL3P20749 454 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 NPBWR2P48146 333 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 BMXP51813 675 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 PLA2G7Q13093 441 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 ZNF181Q2M3W8 571 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 OR10K2Q6IF99 312 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 GCSAMQ8N6F7 178 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 TMEM104Q8NE00 496 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 Q8NFD4 153 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 KCNG3Q8TAE7 436 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 SEH1LQ96EE3 360 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 CEP19Q96LK0 163 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 ZNF488Q96MN9 340 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 MMP27Q9H306 513 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 TMEM165Q9HC07 324 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 RNF7Q9UBF6 113 aa12.55□□□□□ -0.4
TRIM28-207ENST00000597136 FBLN5Q9UBX5 448 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms