RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 RNF222A6NCQ9 220 aa16.96■□□□□ 0.31
CLIP3-206ENST00000593074 PDCD6O75340 191 aa16.96■□□□□ 0.31
CLIP3-206ENST00000593074 CRHP06850 196 aa16.96■□□□□ 0.31
CLIP3-206ENST00000593074 GLRA1P23415 457 aa16.96■□□□□ 0.31
CLIP3-206ENST00000593074 AP2S1P53680 142 aaPredicted RBP16.96■□□□□ 0.31
CLIP3-206ENST00000593074 PLP2Q04941 152 aa16.96■□□□□ 0.31
CLIP3-206ENST00000593074 SLC9A3R2Q15599 337 aa16.96■□□□□ 0.31
CLIP3-206ENST00000593074 COQ8AQ8NI60 647 aa16.96■□□□□ 0.31
CLIP3-206ENST00000593074 FGF23Q9GZV9 251 aaPredicted RBP16.96■□□□□ 0.31
CLIP3-206ENST00000593074 CRIM1Q9NZV1 1036 aa16.96■□□□□ 0.31
CLIP3-206ENST00000593074 C5orf51A6NDU8 294 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 EEF1E1-BLOC1S5C9J1V9 151 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 P2RX3P56373 397 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 ANKRD55Q3KP44 614 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 ALKAL2Q6UX46 152 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 SLC25A26Q70HW3 274 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 ZNF2Q9BSG1 426 aaPredicted RBP16.95■□□□□ 0.3
CLIP3-206ENST00000593074 RDH8Q9NYR8 311 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 STARD10Q9Y365 291 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 ZNHIT1O43257 154 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 NGFP01138 241 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 PMELP40967 661 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 CYCSP99999 105 aaKnown RBP16.95■□□□□ 0.3
CLIP3-206ENST00000593074 CEACAM21Q3KPI0 293 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 TOR2AQ5JU69 321 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 P4HA3Q7Z4N8 544 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 SAXO1Q8IYX7 474 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 BCL2L2Q92843 193 aaPredicted RBP16.95■□□□□ 0.3
CLIP3-206ENST00000593074 WBP1Q96G27 269 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 CHMP1AQ9HD42 196 aaPredicted RBP16.95■□□□□ 0.3
CLIP3-206ENST00000593074 NECAP2Q9NVZ3 263 aa16.95■□□□□ 0.3
CLIP3-206ENST00000593074 C14orf166Q9Y224 244 aaKnown RBP16.95■□□□□ 0.3
CLIP3-206ENST00000593074 CNOT1A5YKK6 2376 aaKnown RBP16.95■□□□□ 0.3
CLIP3-206ENST00000593074 NMBP08949 121 aa16.94■□□□□ 0.3
CLIP3-206ENST00000593074 OR5H8P0DN80 308 aa16.94■□□□□ 0.3
CLIP3-206ENST00000593074 PGAM2P15259 253 aa16.94■□□□□ 0.3
CLIP3-206ENST00000593074 UBA52P62987 128 aaKnown RBP16.94■□□□□ 0.3
CLIP3-206ENST00000593074 HIKESHIQ53FT3 197 aa16.94■□□□□ 0.3
CLIP3-206ENST00000593074 ACOT7LQ6ZUV0 252 aa16.94■□□□□ 0.3
CLIP3-206ENST00000593074 ZDHHC23Q8IYP9 409 aa16.94■□□□□ 0.3
CLIP3-206ENST00000593074 ANGPTL6Q8NI99 470 aa16.94■□□□□ 0.3
CLIP3-206ENST00000593074 THAP6Q8TBB0 222 aa16.94■□□□□ 0.3
CLIP3-206ENST00000593074 DYRK2Q92630 601 aa16.94■□□□□ 0.3
CLIP3-206ENST00000593074 KCNMB2Q9Y691 235 aa16.94■□□□□ 0.3
CLIP3-206ENST00000593074 C13orf42A0A1B0GVH6 325 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 FAM90A10PA6NDY2 464 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 FAM90A18PA6NE21 464 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 FAM90A16PA6NEW6 464 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 FAM90A20PA6NIJ5 464 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 FAM90A8PA6NJQ4 464 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 FAM90A7PA6NKC0 464 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 FAM90A22PA8MWA6 464 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 FAM90A12PA8MX19 464 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 FAM90A5PA8MXJ8 464 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 FAM90A23PA8MXZ1 464 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 FAM90A15PP0C7V4 464 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 FAM90A13PP0C7W8 464 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 FAM90A14PP0C7W9 464 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 FAM90A24PP0C7X0 464 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 PSMB6P28072 239 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 OPRM1P35372 400 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 NPBWR2P48146 333 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 ELP2Q6IA86 826 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 NANOS1Q8WY41 292 aaKnown RBP16.93■□□□□ 0.3
CLIP3-206ENST00000593074 GMPPAQ96IJ6 420 aaPredicted RBP16.93■□□□□ 0.3
CLIP3-206ENST00000593074 MBD2Q9UBB5 411 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 TRBV6-7A0A0A0MS04 114 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 CEACAM4O75871 244 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 CTSDP07339 412 aaPredicted RBP16.93■□□□□ 0.3
CLIP3-206ENST00000593074 FUT3P21217 361 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 APLNRP35414 380 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 WNT5AP41221 380 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 DHRS11Q6UWP2 260 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 TMEM200AQ86VY9 491 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 VRK1Q99986 396 aaPredicted RBP16.93■□□□□ 0.3
CLIP3-206ENST00000593074 DHRS9Q9BPW9 319 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 LIME1Q9H400 295 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 MED9Q9NWA0 146 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 PRR13Q9NZ81 148 aa16.93■□□□□ 0.3
CLIP3-206ENST00000593074 KANTRA0A1W2PQU2 76 aa16.92■□□□□ 0.3
CLIP3-206ENST00000593074 BCL2L11O43521 198 aa16.92■□□□□ 0.3
CLIP3-206ENST00000593074 SPDEFO95238 335 aa16.92■□□□□ 0.3
CLIP3-206ENST00000593074 PTGER4P35408 488 aa16.92■□□□□ 0.3
CLIP3-206ENST00000593074 BRICD5Q6PL45 260 aa16.92■□□□□ 0.3
CLIP3-206ENST00000593074 ZNF75AQ96N20 296 aa16.92■□□□□ 0.3
CLIP3-206ENST00000593074 C12orf4Q9NQ89 552 aa16.92■□□□□ 0.3
CLIP3-206ENST00000593074 GLRX2Q9NS18 164 aa16.92■□□□□ 0.3
CLIP3-206ENST00000593074 CLCF1Q9UBD9 225 aa16.92■□□□□ 0.3
CLIP3-206ENST00000593074 ADAP1O75689 374 aa16.92■□□□□ 0.3
CLIP3-206ENST00000593074 HAAOP46952 286 aa16.92■□□□□ 0.3
CLIP3-206ENST00000593074 GPM6AP51674 278 aa16.92■□□□□ 0.3
CLIP3-206ENST00000593074 ATXN7L3Q14CW9 347 aaPredicted RBP16.92■□□□□ 0.3
CLIP3-206ENST00000593074 OR5M9Q8NGP3 310 aa16.92■□□□□ 0.3
CLIP3-206ENST00000593074 ST8SIA2Q92186 375 aa16.92■□□□□ 0.3
CLIP3-206ENST00000593074 WDR13Q9H1Z4 485 aa16.92■□□□□ 0.3
CLIP3-206ENST00000593074 ZNF629Q9UEG4 869 aaPredicted RBP16.92■□□□□ 0.3
CLIP3-206ENST00000593074 CD300LBA8K4G0 201 aa16.91■□□□□ 0.3
CLIP3-206ENST00000593074 KNG1P01042 644 aa16.91■□□□□ 0.3
CLIP3-206ENST00000593074 RLN2P04090 185 aa16.91■□□□□ 0.3
CLIP3-206ENST00000593074 BCL3P20749 454 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms