RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 FAM234AQ9H0X4 552 aa22.34■■□□□ 1.17
SMAD4-213ENST00000591914 METTL8Q9H825 291 aaKnown RBP22.34■■□□□ 1.17
SMAD4-213ENST00000591914 IRGMA1A4Y4 181 aa22.33■■□□□ 1.17
SMAD4-213ENST00000591914 TK1P04183 234 aa22.33■■□□□ 1.17
SMAD4-213ENST00000591914 ETV1P50549 477 aa22.33■■□□□ 1.17
SMAD4-213ENST00000591914 DLX1P56177 255 aa22.33■■□□□ 1.17
SMAD4-213ENST00000591914 GUCA2AQ02747 115 aa22.33■■□□□ 1.17
SMAD4-213ENST00000591914 MKXQ8IYA7 352 aa22.33■■□□□ 1.17
SMAD4-213ENST00000591914 Q8IYB0 196 aa22.33■■□□□ 1.17
SMAD4-213ENST00000591914 FAM185AQ8N0U4 392 aa22.33■■□□□ 1.17
SMAD4-213ENST00000591914 OR13C9Q8NGT0 318 aa22.33■■□□□ 1.17
SMAD4-213ENST00000591914 PDCD1LG2Q9BQ51 273 aa22.33■■□□□ 1.17
SMAD4-213ENST00000591914 COMMD4Q9H0A8 199 aa22.33■■□□□ 1.17
SMAD4-213ENST00000591914 CAB39Q9Y376 341 aaPredicted RBP22.33■■□□□ 1.17
SMAD4-213ENST00000591914 HSPE1-MOB4S4R3N1 261 aa22.33■■□□□ 1.17
SMAD4-213ENST00000591914 A0A0U1RQK1 487 aa22.32■■□□□ 1.16
SMAD4-213ENST00000591914 INMTO95050 263 aa22.32■■□□□ 1.16
SMAD4-213ENST00000591914 MELTFP08582 738 aa22.32■■□□□ 1.16
SMAD4-213ENST00000591914 GTF2A1P52655 376 aaPredicted RBP22.32■■□□□ 1.16
SMAD4-213ENST00000591914 RPL31P62899 125 aaKnown RBP22.32■■□□□ 1.16
SMAD4-213ENST00000591914 PRB3Q04118 309 aaPredicted RBP22.32■■□□□ 1.16
SMAD4-213ENST00000591914 BLMHQ13867 455 aa22.32■■□□□ 1.16
SMAD4-213ENST00000591914 ZCCHC4Q9H5U6 513 aa22.32■■□□□ 1.16
SMAD4-213ENST00000591914 SEBOXQ9HB31 216 aaPredicted RBP22.32■■□□□ 1.16
SMAD4-213ENST00000591914 DIMT1Q9UNQ2 313 aaKnown RBP22.32■■□□□ 1.16
SMAD4-213ENST00000591914 TRBV2A0A0J9YWF9 115 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 H0YAE9 185 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 K7N7A8 449 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 ZNF737O75373 536 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 CHRM2P08172 466 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 CAPGP40121 348 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 POU3F4P49335 361 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 COL10A1Q03692 680 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 PDZK1IP1Q13113 114 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 KLRD1Q13241 179 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 CCDC58Q4VC31 144 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 NCR3LG1Q68D85 454 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 TMEM200BQ69YZ2 307 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 C16orf87Q6PH81 154 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 PARP16Q8N5Y8 322 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 TMEM86BQ8N661 226 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 RPS4Y2Q8TD47 263 aa22.31■■□□□ 1.16
SMAD4-213ENST00000591914 ALX3O95076 343 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 CYB5AP00167 134 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 GNAO1P09471 354 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 OCM2P0CE71 109 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 OCMP0CE72 109 aaPredicted RBP22.3■■□□□ 1.16
SMAD4-213ENST00000591914 CFPP27918 469 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 NPBWR2P48146 333 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 AWAT1Q58HT5 328 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 XAF1Q6GPH4 301 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 TMPRSS11AQ6ZMR5 421 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 LDLRAD3Q86YD5 345 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 SERPINA12Q8IW75 414 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 OR5D14Q8NGL3 314 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 OR5D13Q8NGL4 314 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 TBC1D15Q8TC07 691 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 SSMEM1Q8WWF3 244 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 EMG1Q92979 244 aaKnown RBP22.3■■□□□ 1.16
SMAD4-213ENST00000591914 DCLRE1BQ9H816 532 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 RBFOX1Q9NWB1 397 aaKnown RBP22.3■■□□□ 1.16
SMAD4-213ENST00000591914 EXOSC1Q9Y3B2 195 aaKnown RBP22.3■■□□□ 1.16
SMAD4-213ENST00000591914 POMT1Q9Y6A1 747 aa22.3■■□□□ 1.16
SMAD4-213ENST00000591914 HAX1O00165 279 aa22.29■■□□□ 1.16
SMAD4-213ENST00000591914 NPFFO15130 113 aa22.29■■□□□ 1.16
SMAD4-213ENST00000591914 BCL3P20749 454 aa22.29■■□□□ 1.16
SMAD4-213ENST00000591914 UBE2E1P51965 193 aa22.29■■□□□ 1.16
SMAD4-213ENST00000591914 FOXL1Q12952 345 aa22.29■■□□□ 1.16
SMAD4-213ENST00000591914 OR2G6Q5TZ20 316 aa22.29■■□□□ 1.16
SMAD4-213ENST00000591914 RPL22L1Q6P5R6 122 aaKnown RBP22.29■■□□□ 1.16
SMAD4-213ENST00000591914 CRIP3Q6Q6R5 217 aa22.29■■□□□ 1.16
SMAD4-213ENST00000591914 RNF144BQ7Z419 303 aa22.29■■□□□ 1.16
SMAD4-213ENST00000591914 ASCC1Q8N9N2 400 aaKnown RBP22.29■■□□□ 1.16
SMAD4-213ENST00000591914 OR4M1Q8NGD0 313 aa22.29■■□□□ 1.16
SMAD4-213ENST00000591914 RGP1Q92546 391 aaPredicted RBP22.29■■□□□ 1.16
SMAD4-213ENST00000591914 IL36RNQ9UBH0 155 aa22.29■■□□□ 1.16
SMAD4-213ENST00000591914 DHDHQ9UQ10 334 aa22.29■■□□□ 1.16
SMAD4-213ENST00000591914 A0A1W2PPH5 198 aa22.28■■□□□ 1.16
SMAD4-213ENST00000591914 SPRY1O43609 319 aaPredicted RBP22.28■■□□□ 1.16
SMAD4-213ENST00000591914 MYL12AP19105 171 aa22.28■■□□□ 1.16
SMAD4-213ENST00000591914 EEF1B2P24534 225 aaKnown RBP22.28■■□□□ 1.16
SMAD4-213ENST00000591914 CDK5R1Q15078 307 aa22.28■■□□□ 1.16
SMAD4-213ENST00000591914 HCP5Q6MZN7 132 aa22.28■■□□□ 1.16
SMAD4-213ENST00000591914 C8orf59Q8N0T1 100 aaPredicted RBP22.28■■□□□ 1.16
SMAD4-213ENST00000591914 FAM58AQ8N1B3 248 aa22.28■■□□□ 1.16
SMAD4-213ENST00000591914 FBLIM1Q8WUP2 373 aa22.28■■□□□ 1.16
SMAD4-213ENST00000591914 TSEN15Q8WW01 171 aaKnown RBP22.28■■□□□ 1.16
SMAD4-213ENST00000591914 RFT1Q96AA3 541 aa22.28■■□□□ 1.16
SMAD4-213ENST00000591914 TMEM80Q96HE8 168 aa22.28■■□□□ 1.16
SMAD4-213ENST00000591914 SPACA5Q96QH8 159 aa22.28■■□□□ 1.16
SMAD4-213ENST00000591914 NEK6Q9HC98 313 aa22.28■■□□□ 1.16
SMAD4-213ENST00000591914 IGKV1-12A0A0C4DH73 117 aa22.27■■□□□ 1.16
SMAD4-213ENST00000591914 SULT1B1O43704 296 aa22.27■■□□□ 1.16
SMAD4-213ENST00000591914 HAND1O96004 215 aa22.27■■□□□ 1.16
SMAD4-213ENST00000591914 IGKV1D-12P01611 117 aa22.27■■□□□ 1.16
SMAD4-213ENST00000591914 ZNF146Q15072 292 aa22.27■■□□□ 1.16
SMAD4-213ENST00000591914 LAIR2Q6ISS4 152 aa22.27■■□□□ 1.16
SMAD4-213ENST00000591914 FIP1L1Q6UN15 594 aaKnown RBP22.27■■□□□ 1.16
SMAD4-213ENST00000591914 OR8H2Q8N162 312 aa22.27■■□□□ 1.16
SMAD4-213ENST00000591914 C11orf42Q8N5U0 333 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms