RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622	CYB5A	P00167	134 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	IGHV1-69	P01742	117 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	PIP	P12273	146 aa	Predicted RBP	13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	PRTN3	P24158	256 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	ST3GAL4	Q11206	333 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	MED21	Q13503	144 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	DEFB112	Q30KQ8	113 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	LAIR2	Q6ISS4	152 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622		Q8IYB0	196 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	PARP16	Q8N5Y8	322 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622		Q8N7P7	452 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	OR5D14	Q8NGL3	314 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	FBLIM1	Q8WUP2	373 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	TSEN15	Q8WW01	171 aa	Known RBP	13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	C1orf147	Q96MC9	270 aa	Predicted RBP	13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	PRDM13	Q9H4Q3	707 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	ZCCHC4	Q9H5U6	513 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	CHCHD3	Q9NX63	227 aa	Known RBP	13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	BABAM2	Q9NXR7	383 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	CLEC2D	Q9UHP7	191 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	DHDH	Q9UQ10	334 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	MDFIC2	A0A1B0GVS7	189 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	EFCAB10	A6NFE3	127 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622		M0R1W7	72 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	ALX3	O95076	343 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	TK1	P04183	234 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	NPBWR2	P48146	333 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	POU3F4	P49335	361 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	ACTG1	P63261	375 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	PDZK1IP1	Q13113	114 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	CDK5R1	Q15078	307 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	METAP1D	Q6UB28	335 aa	Predicted RBP	13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	OR52N1	Q8NH53	320 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	RPS4Y2	Q8TD47	263 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	NRG4	Q8WWG1	115 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	RGP1	Q92546	391 aa	Predicted RBP	13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	DUX5	Q96PT3	197 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	FAM234A	Q9H0X4	552 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	ZMAT3	Q9HA38	289 aa	Known RBP	13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	NEK6	Q9HC98	313 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	SIRT7	Q9NRC8	400 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	PLCXD1	Q9NUJ7	323 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	CNOT2	Q9NZN8	540 aa	Known RBP	13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622	PSORS1C1	Q9UIG5	152 aa		13.48	□□□□□ -0.25
CIRBP-233	ENST00000591622		H0YJX3	145 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	CLDN34	H7C241	214 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	OGG1	O15527	345 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	SPRY1	O43609	319 aa	Predicted RBP	13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	SULT1B1	O43704	296 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	XPNPEP2	O43895	674 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	CHRM2	P08172	466 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	COL10A1	Q03692	680 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	BLMH	Q13867	455 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	SLC9A3R2	Q15599	337 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	RNF144B	Q7Z419	303 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	PDZD9	Q8IXQ8	264 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	FAM185A	Q8N0U4	392 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	GPR148	Q8TDV2	347 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	EMG1	Q92979	244 aa	Known RBP	13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	ZDHHC16	Q969W1	377 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	RFT1	Q96AA3	541 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	SPACA5	Q96QH8	159 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	METTL8	Q9H825	291 aa	Known RBP	13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	SEBOX	Q9HB31	216 aa	Predicted RBP	13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	NOX4	Q9NPH5	578 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	C19orf12	Q9NSK7	152 aa		13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	RBFOX1	Q9NWB1	397 aa	Known RBP	13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.47	□□□□□ -0.25
CIRBP-233	ENST00000591622		K7N7A8	449 aa		13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	ZNF737	O75373	536 aa		13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	LALBA	P00709	142 aa		13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	BCL3	P20749	454 aa		13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	SOX2	P48431	317 aa		13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	RPL31	P62899	125 aa	Known RBP	13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	TMEM200B	Q69YZ2	307 aa		13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	CRIP3	Q6Q6R5	217 aa		13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	FIP1L1	Q6UN15	594 aa	Known RBP	13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	FAM58A	Q8N1B3	248 aa		13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	PIP4P2	Q8N4L2	257 aa		13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	ASCC1	Q8N9N2	400 aa	Known RBP	13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	ZNF485	Q8NCK3	441 aa		13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	BPIFB6	Q8NFQ5	453 aa		13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	TBC1D15	Q8TC07	691 aa		13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	GCDH	Q92947	438 aa	Predicted RBP	13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	TNFRSF14	Q92956	283 aa		13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	SLC25A28	Q96A46	364 aa		13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	SMIM19	Q96E16	107 aa		13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	UNKL	Q9H9P5	680 aa	Known RBP	13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	IL36RN	Q9UBH0	155 aa		13.46	□□□□□ -0.25
CIRBP-233	ENST00000591622	DOCK11	Q5JSL3	2073 aa		13.46	□□□□□ -0.26
CIRBP-233	ENST00000591622	IGKV1-12	A0A0C4DH73	117 aa		13.45	□□□□□ -0.26
CIRBP-233	ENST00000591622		A0A1W2PPH5	198 aa		13.45	□□□□□ -0.26
CIRBP-233	ENST00000591622	TMEM89	A2RUT3	159 aa		13.45	□□□□□ -0.26
CIRBP-233	ENST00000591622	RNASEK-C17orf49	H0YIS7	233 aa		13.45	□□□□□ -0.26
CIRBP-233	ENST00000591622	HOXA3	O43365	443 aa	Predicted RBP	13.45	□□□□□ -0.26
CIRBP-233	ENST00000591622	ANGPTL7	O43827	346 aa		13.45	□□□□□ -0.26
CIRBP-233	ENST00000591622	IGKV1D-12	P01611	117 aa		13.45	□□□□□ -0.26
CIRBP-233	ENST00000591622	CD2	P06729	351 aa		13.45	□□□□□ -0.26
CIRBP-233	ENST00000591622	RNASE1	P07998	156 aa	Known RBP	13.45	□□□□□ -0.26
CIRBP-233	ENST00000591622	HCK	P08631	526 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms