RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 RAG2P55895 527 aa10.29□□□□□ -0.76
CCBE1-203ENST00000589116 RBM11P57052 281 aaKnown RBP10.29□□□□□ -0.76
CCBE1-203ENST00000589116 FGF12P61328 243 aa10.29□□□□□ -0.76
CCBE1-203ENST00000589116 BTG1P62324 171 aa10.29□□□□□ -0.76
CCBE1-203ENST00000589116 OR8G1Q15617 311 aa10.29□□□□□ -0.76
CCBE1-203ENST00000589116 TMEM255AQ5JRV8 349 aa10.29□□□□□ -0.76
CCBE1-203ENST00000589116 RSBN1Q5VWQ0 802 aaPredicted RBP10.29□□□□□ -0.76
CCBE1-203ENST00000589116 OR4C16Q8NGL9 310 aa10.29□□□□□ -0.76
CCBE1-203ENST00000589116 NUDCD2Q8WVJ2 157 aa10.29□□□□□ -0.76
CCBE1-203ENST00000589116 PLK3Q9H4B4 646 aa10.29□□□□□ -0.76
CCBE1-203ENST00000589116 IFT46Q9NQC8 304 aa10.29□□□□□ -0.76
CCBE1-203ENST00000589116 COQ3Q9NZJ6 369 aa10.29□□□□□ -0.76
CCBE1-203ENST00000589116 ELF5Q9UKW6 265 aaPredicted RBP10.29□□□□□ -0.76
CCBE1-203ENST00000589116 ANAPC10Q9UM13 185 aa10.29□□□□□ -0.76
CCBE1-203ENST00000589116 ST3GAL6Q9Y274 331 aa10.29□□□□□ -0.76
CCBE1-203ENST00000589116 POLDIP2Q9Y2S7 368 aa10.29□□□□□ -0.76
CCBE1-203ENST00000589116 KCNK7Q9Y2U2 307 aa10.29□□□□□ -0.76
CCBE1-203ENST00000589116 PRR14LQ5THK1 2151 aa10.29□□□□□ -0.76
CCBE1-203ENST00000589116 UTP20O75691 2785 aaKnown RBP10.29□□□□□ -0.76
CCBE1-203ENST00000589116 C2CD3Q4AC94 2353 aa10.29□□□□□ -0.76
CCBE1-203ENST00000589116 H3BUI4 141 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 CD74P04233 296 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 PMELP40967 661 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 MZT1Q08AG7 82 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 ALKBH6Q3KRA9 238 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 ALKBH2Q6NS38 261 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 STEAP1BQ6NZ63 245 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 HAGHLQ6PII5 290 aaPredicted RBP10.28□□□□□ -0.76
CCBE1-203ENST00000589116 BTN2A1Q7KYR7 527 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 LINC00596Q86U02 117 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 GLCCI1Q86VQ1 547 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 Q8IYB0 196 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 FBXL14Q8N1E6 418 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 NUP37Q8NFH4 326 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 CHAC2Q8WUX2 184 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 SLAMF9Q96A28 289 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 NGBQ9NPG2 151 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 NUDT15Q9NV35 164 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 PLEKHJ1Q9NW61 149 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 NBPF19A0A087WUL8 3843 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 ZNF736B4DX44 427 aaPredicted RBP10.28□□□□□ -0.76
CCBE1-203ENST00000589116 INMT-MINDY4F8WBC2 141 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 SSX5O60225 188 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 IGHV3-13P01766 116 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 CD3DP04234 171 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 NAT1P18440 290 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 BCL3P20749 454 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 CHATP28329 748 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 FABP6P51161 128 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 ARFRP1Q13795 201 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 MEF2DQ14814 521 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 TAF9Q16594 264 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 MPV17LQ2QL34 196 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 PIGYQ3MUY2 71 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 AGAP6Q5VW22 663 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 C22orf34Q6ZV56 151 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 OR13G1Q8NGZ3 307 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 LRRC46Q96FV0 321 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 OCSTAMPQ9BR26 566 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 CXXC4Q9H2H0 198 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 MCUBQ9NWR8 336 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 MTCH1Q9NZJ7 389 aa10.28□□□□□ -0.76
CCBE1-203ENST00000589116 ESPL1Q14674 2120 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 IGLV3-9A0A075B6K5 115 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 ATP6V1G2-DDX39BF2Z307 99 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 GEMIN2O14893 280 aaKnown RBP10.27□□□□□ -0.77
CCBE1-203ENST00000589116 MLNRO43193 412 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 SYNGR1O43759 233 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 PDCD6O75340 191 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 RAB3DO95716 219 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 DHFRP00374 187 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 THBDP07204 575 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 ACAA1P09110 424 aaPredicted RBP10.27□□□□□ -0.77
CCBE1-203ENST00000589116 NPBWR2P48146 333 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 CCR6P51684 374 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 KLF3P57682 345 aaPredicted RBP10.27□□□□□ -0.77
CCBE1-203ENST00000589116 ZNF154Q13106 437 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 ZMYND11Q15326 602 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 TATDN3Q17R31 274 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 ACTBL2Q562R1 376 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 SIGIRRQ6IA17 410 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 WDR86Q86TI4 376 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 WFDC8Q8IUA0 241 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 OR56B4Q8NH76 319 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 TMEM171Q8WVE6 324 aa10.27□□□□□ -0.77
CCBE1-203ENST00000589116 RNASE6Q93091 150 aaKnown RBP10.27□□□□□ -0.77
CCBE1-203ENST00000589116 A0A1B0GUH1 482 aa10.26□□□□□ -0.77
CCBE1-203ENST00000589116 NDUFB6O95139 128 aa10.26□□□□□ -0.77
CCBE1-203ENST00000589116 TRAPPC2P0DI81 140 aa10.26□□□□□ -0.77
CCBE1-203ENST00000589116 TRAPPC2BP0DI82 140 aa10.26□□□□□ -0.77
CCBE1-203ENST00000589116 SELENOVP59797 346 aa10.26□□□□□ -0.77
CCBE1-203ENST00000589116 ADORA2A-AS1P86434 159 aa10.26□□□□□ -0.77
CCBE1-203ENST00000589116 IL13RA2Q14627 380 aa10.26□□□□□ -0.77
CCBE1-203ENST00000589116 RBMS2Q15434 407 aaKnown RBP10.26□□□□□ -0.77
CCBE1-203ENST00000589116 RNASE10Q5GAN6 216 aaKnown RBP10.26□□□□□ -0.77
CCBE1-203ENST00000589116 NKAPLQ5M9Q1 402 aa10.26□□□□□ -0.77
CCBE1-203ENST00000589116 SFRP4Q6FHJ7 346 aaPredicted RBP10.26□□□□□ -0.77
CCBE1-203ENST00000589116 ZNF782Q6ZMW2 699 aaPredicted RBP10.26□□□□□ -0.77
CCBE1-203ENST00000589116 C6orf201Q7Z4U5 140 aa10.26□□□□□ -0.77
CCBE1-203ENST00000589116 RTN4RL2Q86UN3 420 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms