RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 RCC1LQ96I51 464 aaKnown RBP11.23□□□□□ -0.61
VMP1-209ENST00000588915 OR5M11Q96RB7 305 aa11.23□□□□□ -0.61
VMP1-209ENST00000588915 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.23□□□□□ -0.61
VMP1-209ENST00000588915 TVP23BQ9NYZ1 205 aa11.23□□□□□ -0.61
VMP1-209ENST00000588915 OR52A1Q9UKL2 312 aa11.23□□□□□ -0.61
VMP1-209ENST00000588915 COPS3Q9UNS2 423 aa11.23□□□□□ -0.61
VMP1-209ENST00000588915 SNX5Q9Y5X3 404 aa11.23□□□□□ -0.61
VMP1-209ENST00000588915 LINC00312Q9Y6C7 94 aa11.23□□□□□ -0.61
VMP1-209ENST00000588915 R4GMQ9 66 aa11.23□□□□□ -0.61
VMP1-209ENST00000588915 PRR32B1ATL7 298 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 DNAJC8O75937 253 aaPredicted RBP11.22□□□□□ -0.61
VMP1-209ENST00000588915 MRPL3P09001 348 aaKnown RBP11.22□□□□□ -0.61
VMP1-209ENST00000588915 PF4V1P10720 104 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 IGLL1P15814 213 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 CCL1P22362 96 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 CRISP1P54107 249 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 ACTA2P62736 377 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 ACTG2P63267 376 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 ACTC1P68032 377 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 ACTA1P68133 377 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 SLC35A2P78381 396 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 MFGE8Q08431 387 aaPredicted RBP11.22□□□□□ -0.61
VMP1-209ENST00000588915 BCL2L15Q5TBC7 163 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 SLX4IPQ5VYV7 408 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 TMEM236Q5W0B7 351 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 ENTHD1Q8IYW4 607 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 NRBF2Q96F24 287 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 CEP19Q96LK0 163 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 CNN2Q99439 309 aaKnown RBP11.22□□□□□ -0.61
VMP1-209ENST00000588915 PRRG3Q9BZD7 231 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 LIN7BQ9HAP6 207 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 MTCH1Q9NZJ7 389 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 TSSC4Q9Y5U2 329 aaPredicted RBP11.22□□□□□ -0.61
VMP1-209ENST00000588915 SESN1Q9Y6P5 492 aa11.22□□□□□ -0.61
VMP1-209ENST00000588915 KMT2CQ8NEZ4 4911 aaKnown RBP11.22□□□□□ -0.61
VMP1-209ENST00000588915 DSCAML1Q8TD84 2053 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 IGHV2-26A0A0B4J1V2 119 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 MPIG6BO95866 241 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 PRKACGP22612 351 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 HTR1DP28221 377 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 PEX2P28328 305 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 FUT6P51993 359 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 CXCR4P61073 352 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 OR52W1Q6IF63 320 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 MEPCEQ7L2J0 689 aaKnown RBP11.21□□□□□ -0.61
VMP1-209ENST00000588915 CENPVQ7Z7K6 275 aaPredicted RBP11.21□□□□□ -0.61
VMP1-209ENST00000588915 ANGPTL5Q86XS5 388 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 Q8IYB0 196 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 ZNF676Q8N7Q3 588 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 NDNFQ8TB73 568 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 APOL4Q9BPW4 351 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 CLEC7AQ9BXN2 247 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 TMEM133Q9H2Q1 129 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 H2AFY2Q9P0M6 372 aaPredicted RBP11.21□□□□□ -0.61
VMP1-209ENST00000588915 GTF2A1LQ9UNN4 478 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 HILPDAQ9Y5L2 63 aa11.21□□□□□ -0.61
VMP1-209ENST00000588915 NBEAL2Q6ZNJ1 2754 aa11.21□□□□□ -0.62
VMP1-209ENST00000588915 K7EIL1 84 aa11.2□□□□□ -0.62
VMP1-209ENST00000588915 GATBO75879 557 aaKnown RBP11.2□□□□□ -0.62
VMP1-209ENST00000588915 PF4P02776 101 aa11.2□□□□□ -0.62
VMP1-209ENST00000588915 ERP29P30040 261 aaKnown RBP11.2□□□□□ -0.62
VMP1-209ENST00000588915 BRS3P32247 399 aa11.2□□□□□ -0.62
VMP1-209ENST00000588915 ARHGDIBP52566 201 aa11.2□□□□□ -0.62
VMP1-209ENST00000588915 NXNL2Q5VZ03 156 aa11.2□□□□□ -0.62
VMP1-209ENST00000588915 TCF23Q7RTU1 214 aa11.2□□□□□ -0.62
VMP1-209ENST00000588915 RTN4RL2Q86UN3 420 aa11.2□□□□□ -0.62
VMP1-209ENST00000588915 EGFL6Q8IUX8 553 aa11.2□□□□□ -0.62
VMP1-209ENST00000588915 HS3ST5Q8IZT8 346 aa11.2□□□□□ -0.62
VMP1-209ENST00000588915 C10orf35Q96D05 121 aa11.2□□□□□ -0.62
VMP1-209ENST00000588915 GPR61Q9BZJ8 451 aa11.2□□□□□ -0.62
VMP1-209ENST00000588915 PAPOLBQ9NRJ5 636 aaKnown RBP11.2□□□□□ -0.62
VMP1-209ENST00000588915 CLN6Q9NWW5 311 aa11.2□□□□□ -0.62
VMP1-209ENST00000588915 DPM3Q9P2X0 92 aa11.2□□□□□ -0.62
VMP1-209ENST00000588915 UBE2J1Q9Y385 318 aaPredicted RBP11.2□□□□□ -0.62
VMP1-209ENST00000588915 TCRBV4S1A1TA0A5B7 111 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 TMEM82A0PJX8 343 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 ZNF670-ZNF695F2Z2N8 137 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 F8VVB4 439 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 F8VWA3 439 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 CLIC3O95833 236 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 SERPINA3P01011 423 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 EFNB1P98172 346 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 BDH1Q02338 343 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 PTGES3Q15185 160 aaKnown RBP11.19□□□□□ -0.62
VMP1-209ENST00000588915 UBE2V2Q15819 145 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 TMEM95Q3KNT9 176 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 SLC35F2Q8IXU6 374 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 BATF2Q8N1L9 274 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 OR4P4Q8NGL7 312 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 ZNF596Q8TC21 504 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 CAPSLQ8WWF8 208 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 CCDC124Q96CT7 223 aaKnown RBP11.19□□□□□ -0.62
VMP1-209ENST00000588915 CADM1Q9BY67 442 aaKnown RBP11.19□□□□□ -0.62
VMP1-209ENST00000588915 PLEKHA1Q9HB21 404 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 ADGRL4Q9HBW9 690 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 GLS2Q9UI32 602 aa11.19□□□□□ -0.62
VMP1-209ENST00000588915 MRM2Q9UI43 246 aaKnown RBP11.19□□□□□ -0.62
VMP1-209ENST00000588915 FAM230AA0A1W2PPH8 454 aa11.18□□□□□ -0.62
VMP1-209ENST00000588915 A6NIN4 97 aa11.18□□□□□ -0.62
VMP1-209ENST00000588915 M0QZK8 103 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms