RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 RBM11P57052 281 aaKnown RBP18.86■□□□□ 0.61
ATG4D-209ENST00000588857 TNFAIP6P98066 277 aaPredicted RBP18.86■□□□□ 0.61
ATG4D-209ENST00000588857 DGCR2P98153 550 aa18.86■□□□□ 0.61
ATG4D-209ENST00000588857 EFNB3Q15768 340 aa18.86■□□□□ 0.61
ATG4D-209ENST00000588857 TAF9Q16594 264 aa18.86■□□□□ 0.61
ATG4D-209ENST00000588857 PIGYQ3MUY2 71 aa18.86■□□□□ 0.61
ATG4D-209ENST00000588857 CDNFQ49AH0 187 aa18.86■□□□□ 0.61
ATG4D-209ENST00000588857 C19orf18Q8NEA5 215 aa18.86■□□□□ 0.61
ATG4D-209ENST00000588857 POM121Q96HA1 1249 aa18.86■□□□□ 0.61
ATG4D-209ENST00000588857 MEGF10Q96KG7 1140 aa18.86■□□□□ 0.61
ATG4D-209ENST00000588857 ZNF488Q96MN9 340 aa18.86■□□□□ 0.61
ATG4D-209ENST00000588857 ZMAT3Q9HA38 289 aaKnown RBP18.86■□□□□ 0.61
ATG4D-209ENST00000588857 A0A1W2PQ09 198 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 B9A039 149 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 PRSS44E7EML9 344 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 F8VVB4 439 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 F8VWA3 439 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 PTHLHP12272 177 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 MPPED2Q15777 294 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 SP5Q6BEB4 398 aaPredicted RBP18.85■□□□□ 0.61
ATG4D-209ENST00000588857 Q6ZTK2 550 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 C11orf53Q8IXP5 236 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 FAM58AQ8N1B3 248 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 GCDHQ92947 438 aaPredicted RBP18.85■□□□□ 0.61
ATG4D-209ENST00000588857 EMG1Q92979 244 aaKnown RBP18.85■□□□□ 0.61
ATG4D-209ENST00000588857 DYNLRB1Q9NP97 96 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 IL19Q9UHD0 177 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 ISPDA4D126 451 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 C17orf100A8MU93 164 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 GEMIN2O14893 280 aaKnown RBP18.85■□□□□ 0.61
ATG4D-209ENST00000588857 PTBP3O95758 552 aaKnown RBP18.85■□□□□ 0.61
ATG4D-209ENST00000588857 ACAA1P09110 424 aaPredicted RBP18.85■□□□□ 0.61
ATG4D-209ENST00000588857 PGA5P0DJD9 388 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 PRKACAP17612 351 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 DEFA1P59665 94 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 DEFA3P59666 94 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 ZNF260Q3ZCT1 412 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 MEX3BQ6ZN04 569 aaKnown RBP18.85■□□□□ 0.61
ATG4D-209ENST00000588857 OR52I2Q8NH67 350 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 C1orf123Q9NWV4 160 aa18.85■□□□□ 0.61
ATG4D-209ENST00000588857 CACNA1DQ01668 2161 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 hCG_1807616A0A1W2PRN6 198 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 ADH4P08319 380 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 GSTP1P09211 210 aaKnown RBP18.84■□□□□ 0.61
ATG4D-209ENST00000588857 CD3GP09693 182 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 HIST1H1DP16402 221 aaKnown RBP18.84■□□□□ 0.61
ATG4D-209ENST00000588857 GNB3P16520 340 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 SNU13P55769 128 aaKnown RBP18.84■□□□□ 0.61
ATG4D-209ENST00000588857 ARL6IP1Q15041 203 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 NHLRC3Q5JS37 347 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 PLAC9Q5JTB6 97 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 HACD4Q5VWC8 232 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 ZNF787Q6DD87 383 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 ZNF826PQ6ZT77 177 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 MUC15Q8N387 334 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 ITLN1Q8WWA0 313 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 YIPF5Q969M3 257 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 ARHGAP5-AS1Q96IT6 56 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 NRIP2Q9BQI9 281 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 MS4A5Q9H3V2 200 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 FN3KRPQ9HA64 309 aa18.84■□□□□ 0.61
ATG4D-209ENST00000588857 FAM90A10PA6NDY2 464 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 FAM90A18PA6NE21 464 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 FAM90A16PA6NEW6 464 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 TMEM235A6NFC5 223 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 FAM90A20PA6NIJ5 464 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 FAM90A8PA6NJQ4 464 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 FAM90A7PA6NKC0 464 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 FAM90A22PA8MWA6 464 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 FAM90A12PA8MX19 464 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 FAM90A5PA8MXJ8 464 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 FAM90A23PA8MXZ1 464 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 NOS1APO75052 506 aaPredicted RBP18.83■□□□□ 0.6
ATG4D-209ENST00000588857 NXPH2O95156 264 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 FAM90A15PP0C7V4 464 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 FAM90A13PP0C7W8 464 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 FAM90A14PP0C7W9 464 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 FAM90A24PP0C7X0 464 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 TMEM50BP56557 158 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 DAZAP2Q15038 168 aaPredicted RBP18.83■□□□□ 0.6
ATG4D-209ENST00000588857 ZNF57Q68EA5 555 aaPredicted RBP18.83■□□□□ 0.6
ATG4D-209ENST00000588857 WDR82Q6UXN9 313 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 POC1AQ8NBT0 407 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 NEDD4LQ96PU5 975 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 SCPEP1Q9HB40 452 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 PLEKHJ1Q9NW61 149 aa18.83■□□□□ 0.6
ATG4D-209ENST00000588857 MEIOCA2RUB1 952 aa18.82■□□□□ 0.6
ATG4D-209ENST00000588857 FOXI3A8MTJ6 420 aaPredicted RBP18.82■□□□□ 0.6
ATG4D-209ENST00000588857 TPD52L2O43399 206 aaKnown RBP18.82■□□□□ 0.6
ATG4D-209ENST00000588857 LANCL1O43813 399 aa18.82■□□□□ 0.6
ATG4D-209ENST00000588857 ERVK11-1P61568 191 aa18.82■□□□□ 0.6
ATG4D-209ENST00000588857 RGS21Q2M5E4 152 aa18.82■□□□□ 0.6
ATG4D-209ENST00000588857 MST1LQ2TV78 715 aa18.82■□□□□ 0.6
ATG4D-209ENST00000588857 NKAPLQ5M9Q1 402 aa18.82■□□□□ 0.6
ATG4D-209ENST00000588857 FIP1L1Q6UN15 594 aaKnown RBP18.82■□□□□ 0.6
ATG4D-209ENST00000588857 LINC00596Q86U02 117 aa18.82■□□□□ 0.6
ATG4D-209ENST00000588857 MOGAT3Q86VF5 341 aa18.82■□□□□ 0.6
ATG4D-209ENST00000588857 TRIM63Q969Q1 353 aa18.82■□□□□ 0.6
ATG4D-209ENST00000588857 FBXW5Q969U6 566 aa18.82■□□□□ 0.6
ATG4D-209ENST00000588857 ARFGEF3Q5TH69 2177 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms