RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 UPK1BO75841 260 aa16.95■□□□□ 0.3
ATG4D-208ENST00000588667 PYDC2Q56P42 97 aa16.95■□□□□ 0.3
ATG4D-208ENST00000588667 PNLDC1Q8NA58 520 aaKnown RBP16.95■□□□□ 0.3
ATG4D-208ENST00000588667 OR4D6Q8NGJ1 314 aa16.95■□□□□ 0.3
ATG4D-208ENST00000588667 OR5P3Q8WZ94 311 aa16.95■□□□□ 0.3
ATG4D-208ENST00000588667 HPS1Q92902 700 aa16.95■□□□□ 0.3
ATG4D-208ENST00000588667 SLC25A38Q96DW6 304 aa16.95■□□□□ 0.3
ATG4D-208ENST00000588667 S100A16Q96FQ6 103 aaKnown RBP16.95■□□□□ 0.3
ATG4D-208ENST00000588667 RTL8AQ9BWD3 113 aa16.95■□□□□ 0.3
ATG4D-208ENST00000588667 GPR173Q9NS66 373 aa16.95■□□□□ 0.3
ATG4D-208ENST00000588667 RHBDL2Q9NX52 303 aa16.95■□□□□ 0.3
ATG4D-208ENST00000588667 TMEM178BH3BS89 294 aa16.94■□□□□ 0.3
ATG4D-208ENST00000588667 PITPNBP48739 271 aa16.94■□□□□ 0.3
ATG4D-208ENST00000588667 KISS1Q15726 138 aa16.94■□□□□ 0.3
ATG4D-208ENST00000588667 MPPED2Q15777 294 aa16.94■□□□□ 0.3
ATG4D-208ENST00000588667 TMEM249Q2WGJ8 235 aa16.94■□□□□ 0.3
ATG4D-208ENST00000588667 AVPI1Q5T686 147 aa16.94■□□□□ 0.3
ATG4D-208ENST00000588667 CMTM4Q8IZR5 234 aa16.94■□□□□ 0.3
ATG4D-208ENST00000588667 C1orf87Q8N0U7 546 aa16.94■□□□□ 0.3
ATG4D-208ENST00000588667 OR11L1Q8NGX0 322 aa16.94■□□□□ 0.3
ATG4D-208ENST00000588667 HPSE2Q8WWQ2 592 aa16.94■□□□□ 0.3
ATG4D-208ENST00000588667 NKX3-1Q99801 234 aaPredicted RBP16.94■□□□□ 0.3
ATG4D-208ENST00000588667 UFSP2Q9NUQ7 469 aa16.94■□□□□ 0.3
ATG4D-208ENST00000588667 NPTNQ9Y639 398 aa16.94■□□□□ 0.3
ATG4D-208ENST00000588667 LRP5LA4QPB2 252 aa16.93■□□□□ 0.3
ATG4D-208ENST00000588667 BPNT1O95861 308 aa16.93■□□□□ 0.3
ATG4D-208ENST00000588667 PMELP40967 661 aa16.93■□□□□ 0.3
ATG4D-208ENST00000588667 AWAT2Q6E213 333 aa16.93■□□□□ 0.3
ATG4D-208ENST00000588667 WDR86Q86TI4 376 aa16.93■□□□□ 0.3
ATG4D-208ENST00000588667 LURAP1LQ8IV03 231 aa16.93■□□□□ 0.3
ATG4D-208ENST00000588667 NPRL2Q8WTW4 380 aa16.93■□□□□ 0.3
ATG4D-208ENST00000588667 SPACA5Q96QH8 159 aa16.93■□□□□ 0.3
ATG4D-208ENST00000588667 HIST1H2AAQ96QV6 131 aa16.93■□□□□ 0.3
ATG4D-208ENST00000588667 ABCB10Q9NRK6 738 aa16.93■□□□□ 0.3
ATG4D-208ENST00000588667 SLC7A11Q9UPY5 501 aa16.93■□□□□ 0.3
ATG4D-208ENST00000588667 TMEM210A6NLX4 147 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 GRPP07492 148 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 IRF2P14316 349 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 PITPNAQ00169 270 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 ZNF154Q13106 437 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 PYHIN1Q6K0P9 492 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 ANGPTL5Q86XS5 388 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 OR8H2Q8N162 312 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 PTX4Q96A99 478 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 SDHCQ99643 169 aaPredicted RBP16.92■□□□□ 0.3
ATG4D-208ENST00000588667 SMR3AQ99954 134 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 NARFLQ9H6Q4 476 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 MRPS28Q9Y2Q9 187 aaKnown RBP16.92■□□□□ 0.3
ATG4D-208ENST00000588667 MALRD1Q5VYJ5 2156 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 HIVEP2P31629 2446 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 A0A0G2JMP0 313 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 A0A0X1KG70 313 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 TMEM272A0A1B0GTI8 110 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 A6NLC8 198 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 WNT9BO14905 357 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 CYB5R3P00387 301 aaPredicted RBP16.92■□□□□ 0.3
ATG4D-208ENST00000588667 IGHV2-70P01814 119 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 UBBP0CG47 229 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 RBMXP38159 391 aaKnown RBP16.92■□□□□ 0.3
ATG4D-208ENST00000588667 MTCP1P56278 107 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 BTG1P62324 171 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 MADCAM1Q13477 382 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 CEACAM21Q3KPI0 293 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 PLCXD3Q63HM9 321 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 LHFPL2Q6ZUX7 228 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 MOB3CQ70IA8 216 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 OR4M2Q8NGB6 313 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 CLDND2Q8NHS1 167 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 PHF21AQ96BD5 680 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 BORCS8Q96FH0 119 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 RNF170Q96K19 258 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 GHRLQ9UBU3 117 aa16.92■□□□□ 0.3
ATG4D-208ENST00000588667 NSD1Q96L73 2696 aaPredicted RBP16.91■□□□□ 0.3
ATG4D-208ENST00000588667 ISPDA4D126 451 aa16.91■□□□□ 0.3
ATG4D-208ENST00000588667 OR5B21A6NL26 309 aa16.91■□□□□ 0.3
ATG4D-208ENST00000588667 LDLRAD4O15165 306 aa16.91■□□□□ 0.3
ATG4D-208ENST00000588667 RBP2P50120 134 aa16.91■□□□□ 0.3
ATG4D-208ENST00000588667 FUT6P51993 359 aa16.91■□□□□ 0.3
ATG4D-208ENST00000588667 GNG3P63215 75 aa16.91■□□□□ 0.3
ATG4D-208ENST00000588667 IFITM3Q01628 133 aa16.91■□□□□ 0.3
ATG4D-208ENST00000588667 CLEC9AQ6UXN8 241 aa16.91■□□□□ 0.3
ATG4D-208ENST00000588667 SNX29P2Q8IUI4 249 aa16.91■□□□□ 0.3
ATG4D-208ENST00000588667 OR5A2Q8NGI9 324 aa16.91■□□□□ 0.3
ATG4D-208ENST00000588667 C15orf40Q8WUR7 153 aa16.91■□□□□ 0.3
ATG4D-208ENST00000588667 FGF23Q9GZV9 251 aaPredicted RBP16.91■□□□□ 0.3
ATG4D-208ENST00000588667 TLNRD1Q9H1K6 362 aa16.91■□□□□ 0.3
ATG4D-208ENST00000588667 C1orf123Q9NWV4 160 aa16.91■□□□□ 0.3
ATG4D-208ENST00000588667 RNF7Q9UBF6 113 aa16.91■□□□□ 0.3
ATG4D-208ENST00000588667 SONP18583 2426 aaKnown RBP16.91■□□□□ 0.3
ATG4D-208ENST00000588667 TPPPO94811 219 aa16.9■□□□□ 0.3
ATG4D-208ENST00000588667 FSTL3O95633 263 aa16.9■□□□□ 0.3
ATG4D-208ENST00000588667 HEXAP06865 529 aa16.9■□□□□ 0.3
ATG4D-208ENST00000588667 RAB6AP20340 208 aa16.9■□□□□ 0.3
ATG4D-208ENST00000588667 PTGFRP43088 359 aa16.9■□□□□ 0.3
ATG4D-208ENST00000588667 OR3A4PP47883 348 aa16.9■□□□□ 0.3
ATG4D-208ENST00000588667 KRTAP1-1Q07627 177 aa16.9■□□□□ 0.3
ATG4D-208ENST00000588667 ZMYND11Q15326 602 aa16.9■□□□□ 0.3
ATG4D-208ENST00000588667 FAM76BQ5HYJ3 339 aa16.9■□□□□ 0.3
ATG4D-208ENST00000588667 DMRTC1Q5HYR2 192 aa16.9■□□□□ 0.3
ATG4D-208ENST00000588667 TMEM69Q5SWH9 247 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms