RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 GDPD3Q7L5L3 318 aa15.6■□□□□ 0.09
TRAF4-216ENST00000586813 TCF23Q7RTU1 214 aa15.6■□□□□ 0.09
TRAF4-216ENST00000586813 OR8H2Q8N162 312 aa15.6■□□□□ 0.09
TRAF4-216ENST00000586813 PRSS22Q9GZN4 317 aa15.6■□□□□ 0.09
TRAF4-216ENST00000586813 CLN6Q9NWW5 311 aa15.6■□□□□ 0.09
TRAF4-216ENST00000586813 NOTCH3Q9UM47 2321 aa15.59■□□□□ 0.09
TRAF4-216ENST00000586813 FAM230AA0A1W2PPH8 454 aa15.59■□□□□ 0.09
TRAF4-216ENST00000586813 ADARB2-AS1A8MUL3 147 aa15.59■□□□□ 0.09
TRAF4-216ENST00000586813 F8VVB4 439 aa15.59■□□□□ 0.09
TRAF4-216ENST00000586813 F8VWA3 439 aa15.59■□□□□ 0.09
TRAF4-216ENST00000586813 CHRM2P08172 466 aa15.59■□□□□ 0.09
TRAF4-216ENST00000586813 DYNLT3P51808 116 aa15.59■□□□□ 0.09
TRAF4-216ENST00000586813 DYNC1I2Q13409 638 aaKnown RBP15.59■□□□□ 0.09
TRAF4-216ENST00000586813 TCEANCQ8N8B7 351 aa15.59■□□□□ 0.09
TRAF4-216ENST00000586813 OR4F17Q8NGA8 305 aa15.59■□□□□ 0.09
TRAF4-216ENST00000586813 R3HDM4Q96D70 268 aa15.59■□□□□ 0.09
TRAF4-216ENST00000586813 CEP19Q96LK0 163 aa15.59■□□□□ 0.09
TRAF4-216ENST00000586813 ZNF714Q96N38 554 aa15.59■□□□□ 0.09
TRAF4-216ENST00000586813 OR4F4Q96R69 305 aa15.59■□□□□ 0.09
TRAF4-216ENST00000586813 CITED2Q99967 270 aaPredicted RBP15.59■□□□□ 0.09
TRAF4-216ENST00000586813 CADM1Q9BY67 442 aaKnown RBP15.59■□□□□ 0.09
TRAF4-216ENST00000586813 WNT10AQ9GZT5 417 aa15.59■□□□□ 0.09
TRAF4-216ENST00000586813 PLEKHA1Q9HB21 404 aa15.59■□□□□ 0.09
TRAF4-216ENST00000586813 MTCH1Q9NZJ7 389 aa15.59■□□□□ 0.09
TRAF4-216ENST00000586813 EFNB1P98172 346 aa15.58■□□□□ 0.08
TRAF4-216ENST00000586813 SSX6Q7RTT6 188 aa15.58■□□□□ 0.08
TRAF4-216ENST00000586813 TMEM163Q8TC26 289 aa15.58■□□□□ 0.08
TRAF4-216ENST00000586813 MRAPQ8TCY5 172 aa15.58■□□□□ 0.08
TRAF4-216ENST00000586813 SLAMF9Q96A28 289 aa15.58■□□□□ 0.08
TRAF4-216ENST00000586813 OR5M11Q96RB7 305 aa15.58■□□□□ 0.08
TRAF4-216ENST00000586813 H2AFY2Q9P0M6 372 aaPredicted RBP15.58■□□□□ 0.08
TRAF4-216ENST00000586813 SLC7A11Q9UPY5 501 aa15.58■□□□□ 0.08
TRAF4-216ENST00000586813 ZNF281Q9Y2X9 895 aa15.58■□□□□ 0.08
TRAF4-216ENST00000586813 IGKV1-27A0A075B6S5 117 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 F2RL2O00254 374 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 PEX14O75381 377 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 RPP14O95059 124 aaKnown RBP15.57■□□□□ 0.08
TRAF4-216ENST00000586813 KRT8P05787 483 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 OR12D2P58182 307 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 ACTA2P62736 377 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 ACTG2P63267 376 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 ACTC1P68032 377 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 ACTA1P68133 377 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 MEF2CQ06413 473 aaPredicted RBP15.57■□□□□ 0.08
TRAF4-216ENST00000586813 EDDM3AQ14507 147 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 UBE2V2Q15819 145 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 ODF4Q2M2E3 257 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 DNAL1Q4LDG9 190 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 SLX4IPQ5VYV7 408 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 C12orf73Q69YU5 71 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 Q6ZS46 218 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 GID4Q8IVV7 300 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 KRT84Q9NSB2 600 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 NECAP2Q9NVZ3 263 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 POMPQ9Y244 141 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 HILPDAQ9Y5L2 63 aa15.57■□□□□ 0.08
TRAF4-216ENST00000586813 TMEM82A0PJX8 343 aa15.56■□□□□ 0.08
TRAF4-216ENST00000586813 ZAR1LA6NP61 321 aa15.56■□□□□ 0.08
TRAF4-216ENST00000586813 H3BSH0 61 aa15.56■□□□□ 0.08
TRAF4-216ENST00000586813 GYG2O15488 501 aa15.56■□□□□ 0.08
TRAF4-216ENST00000586813 MITFO75030 526 aaPredicted RBP15.56■□□□□ 0.08
TRAF4-216ENST00000586813 JUNBP17275 347 aaPredicted RBP15.56■□□□□ 0.08
TRAF4-216ENST00000586813 EPHA2P29317 976 aa15.56■□□□□ 0.08
TRAF4-216ENST00000586813 BLCAPP62952 87 aa15.56■□□□□ 0.08
TRAF4-216ENST00000586813 TMEM95Q3KNT9 176 aa15.56■□□□□ 0.08
TRAF4-216ENST00000586813 ARSJQ5FYB0 599 aaPredicted RBP15.56■□□□□ 0.08
TRAF4-216ENST00000586813 MINOS1Q5TGZ0 78 aa15.56■□□□□ 0.08
TRAF4-216ENST00000586813 CATSPERDQ86XM0 798 aa15.56■□□□□ 0.08
TRAF4-216ENST00000586813 YIPF7Q8N8F6 280 aa15.56■□□□□ 0.08
TRAF4-216ENST00000586813 SGCDQ92629 289 aa15.56■□□□□ 0.08
TRAF4-216ENST00000586813 UTP4Q969X6 686 aaKnown RBP15.56■□□□□ 0.08
TRAF4-216ENST00000586813 PHF21AQ96BD5 680 aa15.56■□□□□ 0.08
TRAF4-216ENST00000586813 SNX22Q96L94 193 aa15.56■□□□□ 0.08
TRAF4-216ENST00000586813 TBX5Q99593 518 aa15.56■□□□□ 0.08
TRAF4-216ENST00000586813 CHST5Q9GZS9 411 aa15.56■□□□□ 0.08
TRAF4-216ENST00000586813 AURKAIP1Q9NWT8 199 aaPredicted RBP15.56■□□□□ 0.08
TRAF4-216ENST00000586813 MINOS1-NBL1R4GNA1 71 aa15.56■□□□□ 0.08
TRAF4-216ENST00000586813 IGHV2-26A0A0B4J1V2 119 aa15.55■□□□□ 0.08
TRAF4-216ENST00000586813 hADV38S2A0JD32 116 aa15.55■□□□□ 0.08
TRAF4-216ENST00000586813 SYT7O43581 403 aa15.55■□□□□ 0.08
TRAF4-216ENST00000586813 GATBO75879 557 aaKnown RBP15.55■□□□□ 0.08
TRAF4-216ENST00000586813 DNAJC8O75937 253 aaPredicted RBP15.55■□□□□ 0.08
TRAF4-216ENST00000586813 INMTO95050 263 aa15.55■□□□□ 0.08
TRAF4-216ENST00000586813 ALX3O95076 343 aa15.55■□□□□ 0.08
TRAF4-216ENST00000586813 ALDOBP05062 364 aa15.55■□□□□ 0.08
TRAF4-216ENST00000586813 VDAC2P45880 294 aaPredicted RBP15.55■□□□□ 0.08
TRAF4-216ENST00000586813 FUT6P51993 359 aa15.55■□□□□ 0.08
TRAF4-216ENST00000586813 SLC34A1Q06495 639 aa15.55■□□□□ 0.08
TRAF4-216ENST00000586813 SLC25A26Q70HW3 274 aa15.55■□□□□ 0.08
TRAF4-216ENST00000586813 ZNF676Q8N7Q3 588 aa15.55■□□□□ 0.08
TRAF4-216ENST00000586813 EMG1Q92979 244 aaKnown RBP15.55■□□□□ 0.08
TRAF4-216ENST00000586813 IL4I1Q96RQ9 567 aa15.55■□□□□ 0.08
TRAF4-216ENST00000586813 IL36RNQ9UBH0 155 aa15.55■□□□□ 0.08
TRAF4-216ENST00000586813 LINC00312Q9Y6C7 94 aa15.55■□□□□ 0.08
TRAF4-216ENST00000586813 SESN1Q9Y6P5 492 aa15.55■□□□□ 0.08
TRAF4-216ENST00000586813 A0A1W2PQL4 384 aaPredicted RBP15.54■□□□□ 0.08
TRAF4-216ENST00000586813 HAND1O96004 215 aa15.54■□□□□ 0.08
TRAF4-216ENST00000586813 IGHA1P01876 353 aa15.54■□□□□ 0.08
TRAF4-216ENST00000586813 LOXL3P58215 753 aa15.54■□□□□ 0.08
TRAF4-216ENST00000586813 EGFL6Q8IUX8 553 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms