RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 NADKO95544 446 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PIRTP0C851 137 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 UBCP0CG48 685 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PVRP15151 417 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 DDOSTP39656 456 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 CRYBB2P43320 205 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 OR3A4PP47883 348 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 CX3CR1P49238 355 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 FASTKD3Q14CZ7 662 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 KIAA0040Q15053 153 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 TGIF1Q15583 401 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 TRAM1Q15629 374 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 MRGPRG-AS1Q2M3A8 158 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 DEFB134Q4QY38 66 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC22A6Q4U2R8 563 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 METTL11BQ5VVY1 283 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 LIPNQ5VXI9 398 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 FAM219BQ5XKK7 198 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 LEG1Q6P5S2 330 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PAQR6Q6TCH4 344 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 UQCC3Q6UW78 93 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 CCDC121Q6ZUS5 278 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 HIPK1Q86Z02 1210 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 OR4A15Q8NGL6 344 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF502Q8TBZ5 544 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 LKAAEAR1Q8TD35 194 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 NAT14Q8WUY8 206 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PIGCQ92535 297 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 JSRP1Q96MG2 331 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 OXGR1Q96P68 337 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 SIGLEC12Q96PQ1 595 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 OR4K3Q96R72 315 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 GPX7Q96SL4 187 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF442Q9H7R0 627 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ANKRA2Q9H9E1 313 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PAK1IP1Q9NWT1 392 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 MARCOQ9UEW3 520 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 TBC1D24Q9ULP9 559 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PCNX2A6NKB5 2137 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 OR5B21A6NL26 309 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 J3QLI3 93 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF254O75437 659 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 REM1O75628 298 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 DUS4LO95620 317 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 CLIC3O95833 236 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 KLK1P06870 262 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 CCL4P13236 92 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC25A16P16260 332 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF708P17019 499 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 CXCR1P25024 350 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 EVI2BP34910 448 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 CD79BP40259 229 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ETV5P41161 510 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 HNRNPA3P51991 378 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 NDUFV3P56181 108 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 LSM6P62312 80 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 VSNL1P62760 191 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 OC90Q02509 493 aaPredicted RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 SCRN3Q0VDG4 424 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF829Q3KNS6 432 aaPredicted RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 TIMM23BQ5SRD1 257 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 CCBE1Q6UXH8 406 aaPredicted RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 DEFB119Q8N690 84 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 KIR3DL3Q8N743 410 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 OR2M3Q8NG83 312 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 OR5B3Q8NH48 314 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 CCL4L1Q8NHW4 92 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF596Q8TC21 504 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 GNPDA2Q8TDQ7 276 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 NPRL2Q8WTW4 380 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ASB17Q8WXJ9 295 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 MUCL1Q96DR8 90 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 OR52E6Q96RD3 313 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC29A1Q99808 456 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ARHGDIGQ99819 225 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC35A5Q9BS91 424 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 DOHHQ9BU89 302 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 BCL2L14Q9BZR8 327 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 Q9H521 79 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 JPT2Q9H910 190 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF556Q9HAH1 456 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 NUDT15Q9NV35 164 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 DPM3Q9P2X0 92 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 CACFD1Q9UGQ2 172 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 CHTOPQ9Y3Y2 248 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 IGKV1-8A0A0C4DH67 115 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 LOC100653049A0A140TA62 436 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 A0A1W2PRG6 482 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 FUOMA2VDF0 154 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 RNF222A6NCQ9 220 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 FBLL1A6NHQ2 334 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 SMIM23A6NLE4 172 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 RAB29O14966 203 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 KRT34O76011 436 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 UTS2O95399 124 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 RENP00797 406 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 TSHBP01222 138 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 IL3P08700 152 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 TNFRSF1BP20333 461 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 PMCHP20382 165 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms