RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 PRSS57Q6UWY2 283 aa9.8□□□□□ -0.84
CDRT1-207ENST00000583965 C1QL2Q7Z5L3 287 aa9.8□□□□□ -0.84
CDRT1-207ENST00000583965 TGIF2LYQ8IUE0 185 aa9.8□□□□□ -0.84
CDRT1-207ENST00000583965 ZNF525Q8N782 197 aa9.8□□□□□ -0.84
CDRT1-207ENST00000583965 RAB1CQ92928 201 aa9.8□□□□□ -0.84
CDRT1-207ENST00000583965 BORCS5Q969J3 196 aa9.8□□□□□ -0.84
CDRT1-207ENST00000583965 SLC25A28Q96A46 364 aa9.8□□□□□ -0.84
CDRT1-207ENST00000583965 MRPS24Q96EL2 167 aaKnown RBP9.8□□□□□ -0.84
CDRT1-207ENST00000583965 CST11Q9H112 138 aa9.8□□□□□ -0.84
CDRT1-207ENST00000583965 ELL3Q9HB65 397 aaPredicted RBP9.8□□□□□ -0.84
CDRT1-207ENST00000583965 ABRACLQ9P1F3 81 aa9.8□□□□□ -0.84
CDRT1-207ENST00000583965 FBLN5Q9UBX5 448 aa9.8□□□□□ -0.84
CDRT1-207ENST00000583965 DAPK2Q9UIK4 370 aa9.8□□□□□ -0.84
CDRT1-207ENST00000583965 PPIAL4EA0A075B759 164 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 TRAV38-1A0A0B4J264 116 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 SMIM30A4D0T7 59 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 OOEPA6NGQ2 149 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 PPIAL4DF5H284 164 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 LGALS8O00214 317 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 CTDSP2O14595 271 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 PPIAL4FP0DN26 164 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 CALCBP10092 127 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 ARSBP15848 533 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 BCL3P20749 454 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 CD40LGP29965 261 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 CAV3P56539 151 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 FGF12P61328 243 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 BTG1P62324 171 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 MICBQ29980 383 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 NHLRC3Q5JS37 347 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 TEX36Q5VZQ5 186 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 ACP7Q6ZNF0 438 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 OR2W3Q7Z3T1 314 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 FAM58AQ8N1B3 248 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 KCNG3Q8TAE7 436 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 FAM168AQ92567 244 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 EMG1Q92979 244 aaKnown RBP9.79□□□□□ -0.84
CDRT1-207ENST00000583965 FAM3DQ96BQ1 224 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 POM121Q96HA1 1249 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 C1orf147Q96MC9 270 aaPredicted RBP9.79□□□□□ -0.84
CDRT1-207ENST00000583965 CMTM3Q96MX0 182 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 NKX3-1Q99801 234 aaPredicted RBP9.79□□□□□ -0.84
CDRT1-207ENST00000583965 PIMREGQ9BSJ6 248 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 MIXL1Q9H2W2 232 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 LIN7BQ9HAP6 207 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 SEBOXQ9HB31 216 aaPredicted RBP9.79□□□□□ -0.84
CDRT1-207ENST00000583965 DCAF16Q9NXF7 216 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 DNAJB11Q9UBS4 358 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 PPIAL4AQ9Y536 164 aa9.79□□□□□ -0.84
CDRT1-207ENST00000583965 SETXQ7Z333 2677 aaKnown RBP9.79□□□□□ -0.84
CDRT1-207ENST00000583965 NOTCH2Q04721 2471 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 TMEM14DPA8MWL7 114 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.78□□□□□ -0.84
CDRT1-207ENST00000583965 PPIHO43447 177 aaKnown RBP9.78□□□□□ -0.84
CDRT1-207ENST00000583965 NDUFA2O43678 99 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 HTR3BO95264 441 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 KNG1P01042 644 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 IGHV2-70P01814 119 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 SFTPBP07988 381 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 VSIG8P0DPA2 414 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 SLC2A2P11168 524 aaPredicted RBP9.78□□□□□ -0.84
CDRT1-207ENST00000583965 GTF2F2P13984 249 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 EGR1P18146 543 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 SERPINA2P20848 420 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 PTBP1P26599 531 aaKnown RBP eCLIP9.78□□□□□ -0.84
CDRT1-207ENST00000583965 TNFSF8P32971 234 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 MDH2P40926 338 aaKnown RBP9.78□□□□□ -0.84
CDRT1-207ENST00000583965 GPR6P46095 362 aaPredicted RBP9.78□□□□□ -0.84
CDRT1-207ENST00000583965 NPBWR2P48146 333 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 PPP5CP53041 499 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 ZNF146Q15072 292 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 P2RY14Q15391 338 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 FAM189A2Q15884 450 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 CARTPTQ16568 116 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 SLC22A6Q4U2R8 563 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 SPIN3Q5JUX0 258 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 IDNKQ5T6J7 187 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 SHEQ5VZ18 495 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 METAP1DQ6UB28 335 aaPredicted RBP9.78□□□□□ -0.84
CDRT1-207ENST00000583965 DNM1P46Q6ZS02 220 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 LINC00596Q86U02 117 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 OSR2Q8N2R0 312 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 MUC20Q8N307 709 aaPredicted RBP9.78□□□□□ -0.84
CDRT1-207ENST00000583965 BOLLQ8N9W6 283 aaKnown RBP9.78□□□□□ -0.84
CDRT1-207ENST00000583965 OR51D1Q8NGF3 324 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 OR51T1Q8NGJ9 327 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 C10orf105Q8TEF2 133 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 PTX4Q96A99 478 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 ZNF488Q96MN9 340 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 FOXC2Q99958 501 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 DNTTIP1Q9H147 329 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 WDR13Q9H1Z4 485 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 RBFOX1Q9NWB1 397 aaKnown RBP9.78□□□□□ -0.84
CDRT1-207ENST00000583965 NLKQ9UBE8 527 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 GLS2Q9UI32 602 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 ADAM30Q9UKF2 790 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 WIPI2Q9Y4P8 454 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 ETV7Q9Y603 341 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 CR1P17927 2039 aa9.78□□□□□ -0.84
CDRT1-207ENST00000583965 MYO9AB2RTY4 2548 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms