RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 ZNF273Q14593 569 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 AANATQ16613 207 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 FAM76BQ5HYJ3 339 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 CEP78Q5JTW2 689 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 CCBE1Q6UXH8 406 aaPredicted RBP6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 ZNF782Q6ZMW2 699 aaPredicted RBP6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 TMEM219Q86XT9 240 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 NDUFA11Q86Y39 141 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 DYNAPQ8N1N2 210 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 C11orf42Q8N5U0 333 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 IQCF1Q8N6M8 205 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 OR2T33Q8NG76 320 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 OR4F17Q8NGA8 305 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 OR8B12Q8NGG6 310 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 OR5K1Q8NHB7 308 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 OTULINQ96BN8 352 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 CMTM5Q96DZ9 223 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 SDSLQ96GA7 329 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 OR4F4Q96R69 305 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 OR5M11Q96RB7 305 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 CITED2Q99967 270 aaPredicted RBP6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 YY1AP1Q9H869 796 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 ABCB9Q9NP78 766 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 VNN3Q9NY84 501 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 BAIAP2Q9UQB8 552 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 RFPL4AA6NLU0 287 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 RIIAD1A6NNX1 92 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 NUDT19A8MXV4 375 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 ZNF732B4DXR9 585 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 PTGES3LE9PB15 166 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 RFPL4AL1F8VTS6 287 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 SELENOFO60613 162 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 KRT36O76013 467 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 GLCEO94923 617 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 IFNGP01579 166 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 LYNP07948 512 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 IGLL1P15814 213 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 ZNF3P17036 446 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 ATP6V1B2P21281 511 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 PRDX6P30041 224 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 HMGA2P52926 109 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 RPL31P62899 125 aaKnown RBP6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 GNG3P63215 75 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 EMX1Q04741 257 aaPredicted RBP6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 SAMD4BQ5PRF9 694 aaKnown RBP6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 C11orf87Q6NUJ2 197 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 HAGHLQ6PII5 290 aaPredicted RBP6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 ACP7Q6ZNF0 438 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 SHFQ7M4L6 423 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 BATF2Q8N1L9 274 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 Q8N2B8 174 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 CD177Q8N6Q3 437 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 PAPD5Q8NDF8 572 aaKnown RBP6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 OR4M1Q8NGD0 313 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 FAM81AQ8TBF8 368 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 WIPF2Q8TF74 440 aaPredicted RBP6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 AQP3Q92482 292 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 ZNF488Q96MN9 340 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 HIST1H2AAQ96QV6 131 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 CDCA4Q9BXL8 241 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 OR51V1Q9H2C8 321 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 SLC25A32Q9H2D1 315 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 OR51I2Q9H344 312 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 MUC13Q9H3R2 512 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 HEXA-AS1Q9H8Q6 139 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 CMC2Q9NRP2 79 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 MBNL3Q9NUK0 354 aaKnown RBP6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 USE1Q9NZ43 259 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 TCF19Q9Y242 345 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 KLHDC2Q9Y2U9 406 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 U3KQV3 271 aa6.28□□□□□ -1.4
SMCHD1-210ENST00000583800 A0A1W2PRX2 142 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 MEX3AA1L020 520 aaKnown RBP6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 A6NDX4 124 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 VGLL3A8MV65 326 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 K7EIL1 84 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 UBE2CO00762 179 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 MTRF1O75570 445 aaKnown RBP6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 PIPP12273 146 aaPredicted RBP6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 GDNFP39905 211 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 MAGEA2P43356 314 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 CEACAM21Q3KPI0 293 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 VAX1Q5SQQ9 334 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 LDLRAD2Q5SZI1 272 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 PLCXD3Q63HM9 321 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 DGAT2L7PQ6IED9 249 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 MOB3CQ70IA8 216 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 COMMD2Q86X83 199 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 PGAM4Q8N0Y7 254 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 POC1AQ8NBT0 407 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 OTOSQ8NHW6 89 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 ZNF671Q8TAW3 534 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 TEX47Q8TBZ9 253 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 THEM6Q8WUY1 208 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 CDRT15Q96T59 188 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 NIPSNAP1Q9BPW8 284 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 DGCR6LQ9BY27 220 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 KRTAP9-3Q9BYQ3 159 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 NIPAL2Q9H841 368 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms