RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 AADACL4Q5VUY2 407 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 C11orf87Q6NUJ2 197 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 FAHD1Q6P587 224 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 GDPD3Q7L5L3 318 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 TMEM219Q86XT9 240 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 SLC35F2Q8IXU6 374 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 OR8H2Q8N162 312 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 ASCC1Q8N9N2 400 aaKnown RBP8.53□□□□□ -1.04
RFFL-209ENST00000581265 WWC2-AS2Q96NR7 200 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 CITED2Q99967 270 aaPredicted RBP8.53□□□□□ -1.04
RFFL-209ENST00000581265 TTTY10Q9BZA0 68 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 ADGRL4Q9HBW9 690 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 PAPOLBQ9NRJ5 636 aaKnown RBP8.53□□□□□ -1.04
RFFL-209ENST00000581265 CLN6Q9NWW5 311 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 MTCH1Q9NZJ7 389 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 MRM2Q9UI43 246 aaKnown RBP8.53□□□□□ -1.04
RFFL-209ENST00000581265 GTF2A1LQ9UNN4 478 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 MINOS1-NBL1R4GNA1 71 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 TCRBV3S1A0A5B6 114 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 FAM90A22PA8MWA6 464 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 FKBP6O75344 327 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 PEX14O75381 377 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 FAM107AO95990 144 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 DAPP51397 102 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 FUT6P51993 359 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 EDDM3BP56851 147 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 OR12D2P58182 307 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 CD83Q01151 205 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 UBE2V2Q15819 145 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 NXNL2Q5VZ03 156 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 PLEKHG7Q6ZR37 379 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 Q6ZS46 218 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 BCDIN3DQ7Z5W3 292 aaKnown RBP8.52□□□□□ -1.05
RFFL-209ENST00000581265 SPATA24Q86W54 205 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 BATF2Q8N1L9 274 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 CCDC197Q8NCU1 140 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 SNX22Q96L94 193 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 CEP19Q96LK0 163 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 ZNF714Q96N38 554 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 OCSTAMPQ9BR26 566 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 PRRG3Q9BZD7 231 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 AURKAIP1Q9NWT8 199 aaPredicted RBP8.52□□□□□ -1.05
RFFL-209ENST00000581265 H2AFY2Q9P0M6 372 aaPredicted RBP8.52□□□□□ -1.05
RFFL-209ENST00000581265 SLC7A11Q9UPY5 501 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 DSCAML1Q8TD84 2053 aa8.52□□□□□ -1.05
RFFL-209ENST00000581265 IGKV1-27A0A075B6S5 117 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 FAM230AA0A1W2PPH8 454 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 hADV38S2A0JD32 116 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 TMEM82A0PJX8 343 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 MEX3AA1L020 520 aaKnown RBP8.51□□□□□ -1.05
RFFL-209ENST00000581265 ZNF670-ZNF695F2Z2N8 137 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 H3BUI4 141 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 ALDOBP05062 364 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 ACTA2P62736 377 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 ACTG2P63267 376 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 ACTC1P68032 377 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 ACTA1P68133 377 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 DYNC1I2Q13409 638 aaKnown RBP8.51□□□□□ -1.05
RFFL-209ENST00000581265 DOC2BQ14184 412 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 FLOT2Q14254 428 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 SLX4IPQ5VYV7 408 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 TCF23Q7RTU1 214 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 EGFL6Q8IUX8 553 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 TCEANCQ8N8B7 351 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 TRMT10AQ8TBZ6 339 aaKnown RBP8.51□□□□□ -1.05
RFFL-209ENST00000581265 TMEM163Q8TC26 289 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 UTP4Q969X6 686 aaKnown RBP8.51□□□□□ -1.05
RFFL-209ENST00000581265 PHF21AQ96BD5 680 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 OR5M11Q96RB7 305 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 CADM1Q9BY67 442 aaKnown RBP8.51□□□□□ -1.05
RFFL-209ENST00000581265 HILPDAQ9Y5L2 63 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 LINC00312Q9Y6C7 94 aa8.51□□□□□ -1.05
RFFL-209ENST00000581265 IGHV2-26A0A0B4J1V2 119 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 ZAR1LA6NP61 321 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 F2RL2O00254 374 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 SYT7O43581 403 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 DNAJC8O75937 253 aaPredicted RBP8.5□□□□□ -1.05
RFFL-209ENST00000581265 MPIG6BO95866 241 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 SERPINA3P01011 423 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 KRT8P05787 483 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 JUNBP17275 347 aaPredicted RBP8.5□□□□□ -1.05
RFFL-209ENST00000581265 AZGP1P25311 298 aaKnown RBP8.5□□□□□ -1.05
RFFL-209ENST00000581265 PEX2P28328 305 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 EPHA2P29317 976 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 SLC34A1Q06495 639 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 DEFB121Q5J5C9 76 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 FOXB2Q5VYV0 432 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 ZBTB49Q6ZSB9 765 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 SLC25A26Q70HW3 274 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 CATSPERDQ86XM0 798 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 Q8IYB0 196 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 ENTHD1Q8IYW4 607 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 ZNF676Q8N7Q3 588 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 CCDC54Q8NEL0 328 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 OR5AU1Q8NGC0 362 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 OR52N4Q8NGI2 321 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 SLAMF9Q96A28 289 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 C10orf35Q96D05 121 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 CHST5Q9GZS9 411 aa8.5□□□□□ -1.05
RFFL-209ENST00000581265 TMEM133Q9H2Q1 129 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms