RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 OR5R1Q8NH85 324 aa3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 TRMT10AQ8TBZ6 339 aaKnown RBP3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 TMEM163Q8TC26 289 aa3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 RGP1Q92546 391 aaPredicted RBP3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 SLAMF9Q96A28 289 aa3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 EME1Q96AY2 570 aa3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 PHF21AQ96BD5 680 aa3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 COQ2Q96H96 371 aa3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 NKX3-1Q99801 234 aaPredicted RBP3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 CIB1Q99828 191 aa3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 KRTAP9-8Q9BYQ0 159 aa3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 GABARAPL1Q9H0R8 117 aa3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 RANBP3Q9H6Z4 567 aaPredicted RBP3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 SEBOXQ9HB31 216 aaPredicted RBP3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 RBFOX1Q9NWB1 397 aaKnown RBP3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 RASL12Q9NYN1 266 aa3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 FRRS1LQ9P0K9 344 aa3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 LAMP5Q9UJQ1 280 aa3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 OR52A1Q9UKL2 312 aa3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 SF3B6Q9Y3B4 125 aaKnown RBP3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 FAM96BQ9Y3D0 163 aa3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 R4GMQ9 66 aa3.55□□□□□ -1.84
PPP4R1-209ENST00000578329 RYR2Q92736 4967 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 TENM2Q9NT68 2774 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 DYNC2H1Q8NCM8 4307 aaKnown RBP3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 IGHV2-26A0A0B4J1V2 119 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 LOC107986453A0A1B0GWG9 222 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 A0A1W2PQ09 198 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 FAM172BPA6NC97 362 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 ANKRD61A6NGH8 418 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 OR4C45A6NMZ5 311 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 DHRS7CA6NNS2 312 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 LOC110117498-PIK3R3F6TDL0 507 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 H0YAE9 185 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 E2F6O75461 281 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 INMTO95050 263 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 RPP14O95059 124 aaKnown RBP3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 APOC1P02654 83 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 ZNF728P0DKX0 622 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 VSIG10L2P0DP72 767 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 ANXA8P13928 327 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 ATP6V1B1P15313 513 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 IGLL1P15814 213 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 BCL3P20749 454 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 LMO1P25800 156 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 GLIPR1P48060 266 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 ZP1P60852 638 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 MZT1Q08AG7 82 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 BNIP1Q12981 228 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 ZNF146Q15072 292 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 SSX2Q16385 188 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 ODF4Q2M2E3 257 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 C2orf68Q2NKX9 166 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 TP53I3Q53FA7 332 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 FOXB2Q5VYV0 432 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 NXNL2Q5VZ03 156 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 XAF1Q6GPH4 301 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 ZNF529Q6P280 563 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 FDX2Q6P4F2 183 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 SLC25A26Q70HW3 274 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 ASRGL1Q7L266 308 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 C5orf24Q7Z6I8 188 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 CMTM4Q8IZR5 234 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 OR8H2Q8N162 312 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 ZNF561Q8N587 486 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 CCDC197Q8NCU1 140 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 OR51G2Q8NGK0 314 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 OR5D13Q8NGL4 314 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 LRTOMTQ8WZ04 291 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 NRBF2Q96F24 287 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 SPACA5Q96QH8 159 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 OR5M11Q96RB7 305 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 CNN2Q99439 309 aaKnown RBP3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 TBX5Q99593 518 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 GABARAPL3Q9BY60 117 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 KRTAP9-2Q9BYQ4 174 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 PKIBQ9C010 78 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 CHST5Q9GZS9 411 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 CHST6Q9GZX3 395 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 FAM234AQ9H0X4 552 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 PPIL3Q9H2H8 161 aaKnown RBP3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 ZNF286AQ9HBT8 521 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 ABCB9Q9NP78 766 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 PAPOLBQ9NRJ5 636 aaKnown RBP3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 INPP5EQ9NRR6 644 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 CLN6Q9NWW5 311 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 NDE1Q9NXR1 346 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 USE1Q9NZ43 259 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 OR14J1Q9UGF5 321 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 ENPP5Q9UJA9 477 aa3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 SIRT4Q9Y6E7 314 aaPredicted RBP3.54□□□□□ -1.84
PPP4R1-209ENST00000578329 DNAH7Q8WXX0 4024 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 A0A087X0M5 115 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 KRTAP9-6A0A140TA67 174 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 A0A1B0GX30 115 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 FAM230AA0A1W2PPH8 454 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 A0A1W2PPI3 338 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 FAM90A18PA6NE21 464 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 FAM90A16PA6NEW6 464 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms