RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 GTF2F2P13984 249 aa12.04□□□□□ -0.48
RNF43-202ENST00000577625 RAB4AP20338 218 aa12.04□□□□□ -0.48
RNF43-202ENST00000577625 CD34P28906 385 aa12.04□□□□□ -0.48
RNF43-202ENST00000577625 PRKXP51817 358 aa12.04□□□□□ -0.48
RNF43-202ENST00000577625 PLXDC2Q6UX71 529 aa12.04□□□□□ -0.48
RNF43-202ENST00000577625 TGIF2LXQ8IUE1 241 aa12.04□□□□□ -0.48
RNF43-202ENST00000577625 MISP3Q96FF7 219 aa12.04□□□□□ -0.48
RNF43-202ENST00000577625 POMT1Q9Y6A1 747 aa12.04□□□□□ -0.48
RNF43-202ENST00000577625 APC2O95996 2303 aa12.04□□□□□ -0.48
RNF43-202ENST00000577625 IGKV3D-15A0A087WSY6 115 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 MEGF11A6BM72 1044 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 SLC17A2O00624 439 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 XRCC3O43542 346 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 IFNA2P01563 188 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 ITGA5P08648 1049 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 AKR1C3P42330 323 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 OR2B8PP59922 312 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 HIST1H3AP68431 136 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 SLC10A1Q14973 349 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 DEFB109BQ30KR1 87 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 HIST2H3PS2Q5TEC6 136 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 FAM27BQ5VT28 67 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 FAM166AQ6J272 317 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 ADAM5Q6NVV9 412 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 HIST2H3AQ71DI3 136 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 OR56B1Q8NGI3 324 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 TMED6Q8WW62 240 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 TMEM45BQ96B21 275 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 ALKBH3Q96Q83 286 aaPredicted RBP12.03□□□□□ -0.48
RNF43-202ENST00000577625 SULT4A1Q9BR01 284 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 HRH4Q9H3N8 390 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 MED12LQ86YW9 2145 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 CEP295Q9C0D2 2601 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 TEX13DA0A0J9YY54 714 aaPredicted RBP12.03□□□□□ -0.48
RNF43-202ENST00000577625 IFITM10A6NMD0 228 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 SYT7O43581 403 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 YIF1AO95070 293 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 HLA-GP17693 338 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 CEACAM6P40199 344 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 PCP4P48539 62 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 CX3CR1P49238 355 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 GSK3AP49840 483 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 ZNF121P58317 390 aaPredicted RBP12.03□□□□□ -0.48
RNF43-202ENST00000577625 RIPPLY2Q5TAB7 128 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 PAQR4Q8N4S7 273 aaPredicted RBP12.03□□□□□ -0.48
RNF43-202ENST00000577625 CPT1CQ8TCG5 803 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 SMIM8Q96KF7 97 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 DOCK7Q96N67 2140 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 MICU1Q9BPX6 476 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 SLC25A21Q9BQT8 299 aaPredicted RBP12.03□□□□□ -0.48
RNF43-202ENST00000577625 MRPL37Q9BZE1 423 aaKnown RBP12.03□□□□□ -0.48
RNF43-202ENST00000577625 ZDHHC11Q9H8X9 412 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 CRLF2Q9HC73 371 aa12.03□□□□□ -0.48
RNF43-202ENST00000577625 C7orf77A4D0Y5 90 aa12.02□□□□□ -0.48
RNF43-202ENST00000577625 FAM157AC9JC47 383 aa12.02□□□□□ -0.48
RNF43-202ENST00000577625 LMX1BO60663 402 aa12.02□□□□□ -0.48
RNF43-202ENST00000577625 FBXO24O75426 580 aa12.02□□□□□ -0.48
RNF43-202ENST00000577625 PAX1P15863 534 aa12.02□□□□□ -0.48
RNF43-202ENST00000577625 PMP22Q01453 160 aa12.02□□□□□ -0.48
RNF43-202ENST00000577625 SSBP1Q04837 148 aaKnown RBP12.02□□□□□ -0.48
RNF43-202ENST00000577625 RAB11BQ15907 218 aa12.02□□□□□ -0.48
RNF43-202ENST00000577625 C3AR1Q16581 482 aa12.02□□□□□ -0.48
RNF43-202ENST00000577625 DHRS11Q6UWP2 260 aa12.02□□□□□ -0.48
RNF43-202ENST00000577625 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.02□□□□□ -0.48
RNF43-202ENST00000577625 GPR137CQ8N3F9 429 aa12.02□□□□□ -0.48
RNF43-202ENST00000577625 LRRC18Q8N456 261 aa12.02□□□□□ -0.48
RNF43-202ENST00000577625 PLPP7Q8NBV4 271 aa12.02□□□□□ -0.48
RNF43-202ENST00000577625 FNDC9Q8TBE3 224 aa12.02□□□□□ -0.48
RNF43-202ENST00000577625 ISOC2Q96AB3 205 aa12.02□□□□□ -0.48
RNF43-202ENST00000577625 DEFB127Q9H1M4 99 aa12.02□□□□□ -0.48
RNF43-202ENST00000577625 CDV3Q9UKY7 258 aaKnown RBP12.02□□□□□ -0.48
RNF43-202ENST00000577625 FRYQ5TBA9 3013 aa12.02□□□□□ -0.48
RNF43-202ENST00000577625 ACACAQ13085 2346 aa12.02□□□□□ -0.49
RNF43-202ENST00000577625 EFSO43281 561 aa12.02□□□□□ -0.49
RNF43-202ENST00000577625 CEACAM4O75871 244 aa12.02□□□□□ -0.49
RNF43-202ENST00000577625 SYNGR4O95473 234 aa12.02□□□□□ -0.49
RNF43-202ENST00000577625 ANOS1P23352 680 aa12.02□□□□□ -0.49
RNF43-202ENST00000577625 MAS1LP35410 378 aa12.02□□□□□ -0.49
RNF43-202ENST00000577625 DVL1P1P54792 670 aaPredicted RBP12.02□□□□□ -0.49
RNF43-202ENST00000577625 NUTF2P61970 127 aaKnown RBP12.02□□□□□ -0.49
RNF43-202ENST00000577625 AWAT1Q58HT5 328 aa12.02□□□□□ -0.49
RNF43-202ENST00000577625 ZNF283Q8N7M2 679 aa12.02□□□□□ -0.49
RNF43-202ENST00000577625 NKAIN3Q8N8D7 197 aa12.02□□□□□ -0.49
RNF43-202ENST00000577625 OR51D1Q8NGF3 324 aa12.02□□□□□ -0.49
RNF43-202ENST00000577625 OR8B12Q8NGG6 310 aa12.02□□□□□ -0.49
RNF43-202ENST00000577625 OR51A2Q8NGJ7 313 aa12.02□□□□□ -0.49
RNF43-202ENST00000577625 SEC22AQ96IW7 307 aa12.02□□□□□ -0.49
RNF43-202ENST00000577625 METTL9Q9H1A3 318 aa12.02□□□□□ -0.49
RNF43-202ENST00000577625 TMEM38BQ9NVV0 291 aa12.02□□□□□ -0.49
RNF43-202ENST00000577625 MCTS1Q9ULC4 181 aaKnown RBP12.02□□□□□ -0.49
RNF43-202ENST00000577625 NOP16Q9Y3C1 178 aaKnown RBP12.02□□□□□ -0.49
RNF43-202ENST00000577625 DCHS1Q96JQ0 3298 aa12.02□□□□□ -0.49
RNF43-202ENST00000577625 SNRNP70P08621 437 aaKnown RBP12.01□□□□□ -0.49
RNF43-202ENST00000577625 PGAM2P15259 253 aa12.01□□□□□ -0.49
RNF43-202ENST00000577625 OTX1P32242 354 aaPredicted RBP12.01□□□□□ -0.49
RNF43-202ENST00000577625 DHRS2Q13268 280 aa12.01□□□□□ -0.49
RNF43-202ENST00000577625 KIAA0141Q14154 515 aaPredicted RBP12.01□□□□□ -0.49
RNF43-202ENST00000577625 STEAP1BQ6NZ63 245 aa12.01□□□□□ -0.49
RNF43-202ENST00000577625 OR51E1Q8TCB6 317 aa12.01□□□□□ -0.49
RNF43-202ENST00000577625 CA5BP1Q8WTZ4 195 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms