RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 LALBAP00709 142 aa17.05■□□□□ 0.32
CHMP6-204ENST00000572778 BRD3OSQ6XYD6 125 aa17.05■□□□□ 0.32
CHMP6-204ENST00000572778 CMTM4Q8IZR5 234 aa17.05■□□□□ 0.32
CHMP6-204ENST00000572778 ZNF561Q8N587 486 aa17.05■□□□□ 0.32
CHMP6-204ENST00000572778 PARP16Q8N5Y8 322 aa17.05■□□□□ 0.32
CHMP6-204ENST00000572778 GPR148Q8TDV2 347 aa17.05■□□□□ 0.32
CHMP6-204ENST00000572778 RGP1Q92546 391 aaPredicted RBP17.05■□□□□ 0.32
CHMP6-204ENST00000572778 EMG1Q92979 244 aaKnown RBP17.05■□□□□ 0.32
CHMP6-204ENST00000572778 C19orf24Q9BVV8 132 aa17.05■□□□□ 0.32
CHMP6-204ENST00000572778 SOX21Q9Y651 276 aaPredicted RBP17.05■□□□□ 0.32
CHMP6-204ENST00000572778 KPTNQ9Y664 436 aa17.05■□□□□ 0.32
CHMP6-204ENST00000572778 SULT1B1O43704 296 aa17.04■□□□□ 0.32
CHMP6-204ENST00000572778 MT-ND2P03891 347 aa17.04■□□□□ 0.32
CHMP6-204ENST00000572778 HCKP08631 526 aa17.04■□□□□ 0.32
CHMP6-204ENST00000572778 C21orf33P30042 268 aaPredicted RBP17.04■□□□□ 0.32
CHMP6-204ENST00000572778 NPBWR2P48146 333 aa17.04■□□□□ 0.32
CHMP6-204ENST00000572778 PDZK1IP1Q13113 114 aa17.04■□□□□ 0.32
CHMP6-204ENST00000572778 PDCD1Q15116 288 aa17.04■□□□□ 0.32
CHMP6-204ENST00000572778 C6orf141Q5SZD1 244 aa17.04■□□□□ 0.32
CHMP6-204ENST00000572778 ZFP41Q8N8Y5 198 aa17.04■□□□□ 0.32
CHMP6-204ENST00000572778 C8orf46Q8TAG6 207 aa17.04■□□□□ 0.32
CHMP6-204ENST00000572778 RPS4Y2Q8TD47 263 aa17.04■□□□□ 0.32
CHMP6-204ENST00000572778 LHX4Q969G2 390 aa17.04■□□□□ 0.32
CHMP6-204ENST00000572778 ZNF281Q9Y2X9 895 aa17.04■□□□□ 0.32
CHMP6-204ENST00000572778 CENPVL3A0A0U1RRI6 287 aa17.03■□□□□ 0.32
CHMP6-204ENST00000572778 MYL12BO14950 172 aa17.03■□□□□ 0.32
CHMP6-204ENST00000572778 ANGPTL7O43827 346 aa17.03■□□□□ 0.32
CHMP6-204ENST00000572778 CD2P06729 351 aa17.03■□□□□ 0.32
CHMP6-204ENST00000572778 BCL3P20749 454 aa17.03■□□□□ 0.32
CHMP6-204ENST00000572778 RNF144BQ7Z419 303 aa17.03■□□□□ 0.32
CHMP6-204ENST00000572778 VMO1Q7Z5L0 202 aa17.03■□□□□ 0.32
CHMP6-204ENST00000572778 PDZD9Q8IXQ8 264 aa17.03■□□□□ 0.32
CHMP6-204ENST00000572778 Q8IYB0 196 aa17.03■□□□□ 0.32
CHMP6-204ENST00000572778 FAM185AQ8N0U4 392 aa17.03■□□□□ 0.32
CHMP6-204ENST00000572778 OR5D18Q8NGL1 313 aa17.03■□□□□ 0.32
CHMP6-204ENST00000572778 SMIM19Q96E16 107 aa17.03■□□□□ 0.32
CHMP6-204ENST00000572778 DMRTB1Q96MA1 342 aa17.03■□□□□ 0.32
CHMP6-204ENST00000572778 ZNF48Q96MX3 618 aaPredicted RBP17.03■□□□□ 0.32
CHMP6-204ENST00000572778 RBFOX1Q9NWB1 397 aaKnown RBP17.03■□□□□ 0.32
CHMP6-204ENST00000572778 SCN3BQ9NY72 215 aa17.03■□□□□ 0.32
CHMP6-204ENST00000572778 TRBV23-1A0A0A0MS06 115 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 PTGES3LE9PB15 166 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 TRIM77I1YAP6 450 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 CHRM2P08172 466 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 CALCBP10092 127 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 RAB3AP20336 220 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 SNU13P55769 128 aaKnown RBP17.02■□□□□ 0.32
CHMP6-204ENST00000572778 BPIFB3P59826 476 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 COL10A1Q03692 680 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 RUSC1-AS1Q66K80 236 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 DMKNQ6E0U4 476 aaPredicted RBP17.02■□□□□ 0.32
CHMP6-204ENST00000572778 FIP1L1Q6UN15 594 aaKnown RBP17.02■□□□□ 0.32
CHMP6-204ENST00000572778 IZUMO2Q6UXV1 221 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 C9orf139Q6ZV77 190 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 FAM58AQ8N1B3 248 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 KIR3DL3Q8N743 410 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 ASCC1Q8N9N2 400 aaKnown RBP17.02■□□□□ 0.32
CHMP6-204ENST00000572778 ZNF485Q8NCK3 441 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 SPATA3Q8NHX4 192 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 GHSRQ92847 366 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 TMEM106AQ96A25 262 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 ESM1Q9NQ30 184 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 SIRT7Q9NRC8 400 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 FKBP14Q9NWM8 211 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 IL36RNQ9UBH0 155 aa17.02■□□□□ 0.32
CHMP6-204ENST00000572778 PNMA8CA0A1B0GUJ8 204 aa17.01■□□□□ 0.31
CHMP6-204ENST00000572778 MAGEB3O15480 346 aa17.01■□□□□ 0.31
CHMP6-204ENST00000572778 ALX3O95076 343 aa17.01■□□□□ 0.31
CHMP6-204ENST00000572778 TK1P04183 234 aa17.01■□□□□ 0.31
CHMP6-204ENST00000572778 PRKACAP17612 351 aa17.01■□□□□ 0.31
CHMP6-204ENST00000572778 BAMBIQ13145 260 aa17.01■□□□□ 0.31
CHMP6-204ENST00000572778 BLMHQ13867 455 aa17.01■□□□□ 0.31
CHMP6-204ENST00000572778 KISS1Q15726 138 aa17.01■□□□□ 0.31
CHMP6-204ENST00000572778 ZDHHC22Q8N966 263 aa17.01■□□□□ 0.31
CHMP6-204ENST00000572778 OR13C5Q8NGS8 318 aa17.01■□□□□ 0.31
CHMP6-204ENST00000572778 C19orf12Q9NSK7 152 aa17.01■□□□□ 0.31
CHMP6-204ENST00000572778 TAS2R4Q9NYW5 299 aa17.01■□□□□ 0.31
CHMP6-204ENST00000572778 ERGIC3Q9Y282 383 aa17.01■□□□□ 0.31
CHMP6-204ENST00000572778 IGKV1-12A0A0C4DH73 117 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 ATP6V1G2O95670 118 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 IGKV1D-12P01611 117 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 CDK1P06493 297 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 TMEM225BP0DP42 221 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 MYF6P23409 242 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 DUSP1P28562 367 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 WNT4P56705 351 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 TAS2R43P59537 309 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 PRB3Q04118 309 aaPredicted RBP17■□□□□ 0.31
CHMP6-204ENST00000572778 TUSC1Q2TAM9 212 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 SATL1Q86VE3 508 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 Q8N7P7 452 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 NANOGP1Q8N7R0 232 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17■□□□□ 0.31
CHMP6-204ENST00000572778 OR4M1Q8NGD0 313 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 OR51A2Q8NGJ7 313 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 ZFAND2BQ8WV99 257 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 MYDGFQ969H8 173 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 DUX5Q96PT3 197 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 GPER1Q99527 375 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 FAM234AQ9H0X4 552 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms