RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 ERVK11-1P61568 191 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 ACTA2P62736 377 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 ACTG2P63267 376 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 ACTC1P68032 377 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 ACTA1P68133 377 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 EMX1Q04741 257 aaPredicted RBP6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 SLC34A1Q06495 639 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 LIAT1Q6ZQX7 453 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 MEPCEQ7L2J0 689 aaKnown RBP6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 GDPD3Q7L5L3 318 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 TCF23Q7RTU1 214 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 YIPF7Q8N8F6 280 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 OR4S1Q8NGB4 309 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 OR13D1Q8NGV5 346 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 MALSU1Q96EH3 234 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 CEP19Q96LK0 163 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 PRSS22Q9GZN4 317 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 CHST6Q9GZX3 395 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 ADGRL4Q9HBW9 690 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 HES4Q9HCC6 221 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 AURKAIP1Q9NWT8 199 aaPredicted RBP6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 MTCH1Q9NZJ7 389 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 H2AFY2Q9P0M6 372 aaPredicted RBP6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 IL36RNQ9UBH0 155 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 FAM172BPA6NC97 362 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 SH2D7A6NKC9 451 aaPredicted RBP6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 F2RL2O00254 374 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 SYT7O43581 403 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 MMP23AO75900 390 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 CHRM2P08172 466 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 IGLL1P15814 213 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 GABRR1P24046 479 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 MPZP25189 248 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 VDAC2P45880 294 aaPredicted RBP6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 OR12D2P58182 307 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 LOXL3P58215 753 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 IL24Q13007 206 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 UBE2V2Q15819 145 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 AADACL4Q5VUY2 407 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 FOXB2Q5VYV0 432 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 ZNF626Q68DY1 528 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 FAHD1Q6P587 224 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 BAIAP2L2Q6UXY1 529 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 SLC25A26Q70HW3 274 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 NDUFA11Q86Y39 141 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 EGFL6Q8IUX8 553 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 RDH10Q8IZV5 341 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 Q8N2B8 174 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 ZNF676Q8N7Q3 588 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 OR4F17Q8NGA8 305 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 OR11H6Q8NGC7 330 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 OR52N4Q8NGI2 321 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 NDNFQ8TB73 568 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 EMG1Q92979 244 aaKnown RBP6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 PHF21AQ96BD5 680 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 FOXRED1Q96CU9 486 aaPredicted RBP6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 ZNF714Q96N38 554 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 OR4F4Q96R69 305 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 MOB1AQ9H8S9 216 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 PLEKHA1Q9HB21 404 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 NECAP2Q9NVZ3 263 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 SLC7A11Q9UPY5 501 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 TBL2Q9Y4P3 447 aaKnown RBP6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 SNX5Q9Y5X3 404 aa6.92□□□□□ -1.3
CTDNEP1-203ENST00000570385 IGHV2-26A0A0B4J1V2 119 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 A0A1W2PQL4 384 aaPredicted RBP6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 TCRBV3S1A0A5B6 114 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 hADV38S2A0JD32 116 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 GYG2O15488 501 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 XPNPEP2O43895 674 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 MPIG6BO95866 241 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 FAM107AO95990 144 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 HAND1O96004 215 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 KRT8P05787 483 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 CD33P20138 364 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 NPBWR2P48146 333 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 POU3F4P49335 361 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 ACTR3P61158 418 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 GRK1Q15835 563 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 NXNL2Q5VZ03 156 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 CCDC121Q6ZUS5 278 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 REC114Q7Z4M0 266 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 TRAPPC6BQ86SZ2 158 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 OR8H2Q8N162 312 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 DTX3Q8N9I9 347 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 OR10H4Q8NGA5 316 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 OR5AU1Q8NGC0 362 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 TMEM163Q8TC26 289 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 BCAS4Q8TDM0 211 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 WIPF2Q8TF74 440 aaPredicted RBP6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 ITFG2Q969R8 447 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 SNX22Q96L94 193 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 ADI1Q9BV57 179 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 PKIBQ9C010 78 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 WNT10AQ9GZT5 417 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 RBFOX1Q9NWB1 397 aaKnown RBP6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 CLN6Q9NWW5 311 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 ING3Q9NXR8 418 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 PITPNC1Q9UKF7 332 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms