RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SLC34A1Q06495 639 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 ODF4Q2M2E3 257 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 SMIM21Q3B7S5 101 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 CLVS2Q5SYC1 327 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 LHFPL4Q7Z7J7 247 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 C1QL4Q86Z23 238 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 ZNF555Q8NEP9 628 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 OR5R1Q8NH85 324 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 RNFT2Q96EX2 444 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 Q96MT0 163 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 C8orf4Q9NR00 106 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 RASL12Q9NYN1 266 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 FOXJ3Q9UPW0 622 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 CAB39Q9Y376 341 aaPredicted RBP11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 LOC100130705A0A1B0GUX0 176 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 METTL15A6NJ78 407 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 TIMM23O14925 209 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 ZNF737O75373 536 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 RPP14O95059 124 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 PIPP12273 146 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 JUNBP17275 347 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 COX7A1P24310 79 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 CAPZA1P52907 286 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 UBE2V2Q15819 145 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 ZNF782Q6ZMW2 699 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 CATSPERDQ86XM0 798 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 ZNF573Q86YE8 665 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 ENTHD1Q8IYW4 607 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 PRSS35Q8N3Z0 413 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 OR5D13Q8NGL4 314 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 TRMT10AQ8TBZ6 339 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 MYCBPQ99417 103 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 MEGF9Q9H1U4 602 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 FAM118AQ9NWS6 357 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 SMPD3Q9NY59 655 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 MTCH1Q9NZJ7 389 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 IL36RNQ9UBH0 155 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 OR14J1Q9UGF5 321 aa11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 SF3B6Q9Y3B4 125 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-211ENST00000569653 TMEM82A0PJX8 343 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 BTBD17A6NE02 478 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 ANKRD61A6NGH8 418 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 DHRS7CA6NNS2 312 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 SLC16A6O15403 523 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 NXPH2O95156 264 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 TK1P04183 234 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 KIR3DL2P43630 455 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 ISL1P61371 349 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 BLMHQ13867 455 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 LRRC75BQ2VPJ9 315 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 CCBE1Q6UXH8 406 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 RNF144BQ7Z419 303 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 ZNF561Q8N587 486 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 PACRGLQ8N7B6 248 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 FAM110DQ8TAY7 271 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 MRPL48Q96GC5 212 aaKnown RBP11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 FBLN5Q9UBX5 448 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 AASSQ9UDR5 926 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 GNG8Q9UK08 70 aa11.21□□□□□ -0.61
GTF3C1-211ENST00000569653 DAPL1A0PJW8 107 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 FAM90A8PA6NJQ4 464 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 C17orf98A8MV24 154 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 ODF3BA8MYP8 253 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 K7N7A8 449 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 RRP9O43818 475 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 DBTP11182 482 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 GABRB1P18505 474 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 GABRA5P31644 462 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 RAB13P51153 203 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 ACTA2P62736 377 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 ACTG2P63267 376 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 COL10A1Q03692 680 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 ZNF85Q03923 595 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 ZNF91Q05481 1191 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 RIPK1Q13546 671 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 HABP2Q14520 560 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 KCTD20Q7Z5Y7 419 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 RDH10Q8IZV5 341 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 ACBD7Q8N6N7 88 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 C11orf44Q8N8P7 122 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 RHOXF1Q8NHV9 184 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 CFHR4Q92496 578 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 PKIBQ9C010 78 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 PLEKHA1Q9HB21 404 aa11.2□□□□□ -0.62
GTF3C1-211ENST00000569653 IGKV1-9A0A0C4DH69 117 aa11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 FAM230AA0A1W2PPH8 454 aa11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 H0YHG0 523 aa11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 J3QRE1 110 aa11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 SLC1A7O00341 560 aa11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 INMTO95050 263 aa11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 ATP6V1G2O95670 118 aa11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 UBCP0CG48 685 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 KIR2DS4P43632 304 aa11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 ADARB1P78563 741 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 IL24Q13007 206 aa11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 TP53I3Q53FA7 332 aa11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 PLA1AQ53H76 456 aa11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 CCDC54Q8NEL0 328 aa11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 OR52N4Q8NGI2 321 aa11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 SLAMF9Q96A28 289 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms