RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 HCKP08631 526 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 PRDX6P30041 224 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 IFNA8P32881 189 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 KDELR2P33947 212 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 CDKN2AP42771 156 aaKnown RBP4.6□□□□□ -1.67
CDH13-212ENST00000569144 OR1E2P47887 323 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 NUDT2P50583 147 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 RPS7P62081 194 aaKnown RBP4.6□□□□□ -1.67
CDH13-212ENST00000569144 FAM3AP98173 230 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 LIPEQ05469 1076 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 FOXI1Q12951 378 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 DYNC1I2Q13409 638 aaKnown RBP4.6□□□□□ -1.67
CDH13-212ENST00000569144 IL18R1Q13478 541 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 SNCBQ16143 134 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 ZNF260Q3ZCT1 412 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 CD300EQ496F6 205 aaPredicted RBP4.6□□□□□ -1.67
CDH13-212ENST00000569144 LRRC23Q53EV4 343 aaPredicted RBP4.6□□□□□ -1.67
CDH13-212ENST00000569144 FAM76BQ5HYJ3 339 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 C9orf152Q5JTZ5 239 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 LCN8Q6JVE9 175 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 TMPRSS11FQ6ZWK6 438 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 SLC16A9Q7RTY1 509 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 RNF113BQ8IZP6 322 aaKnown RBP4.6□□□□□ -1.67
CDH13-212ENST00000569144 OR4M1Q8NGD0 313 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 OR4C15Q8NGM1 316 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 OR2T27Q8NH04 317 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 NDNFQ8TB73 568 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 BCAS4Q8TDM0 211 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 GATAD1Q8WUU5 269 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 CMTM5Q96DZ9 223 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 PRRC1Q96M27 445 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 HOPXQ9BPY8 73 aaPredicted RBP4.6□□□□□ -1.67
CDH13-212ENST00000569144 PAPOLGQ9BWT3 736 aaKnown RBP4.6□□□□□ -1.67
CDH13-212ENST00000569144 PPP1R3EQ9H7J1 279 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 EFCAB1Q9HAE3 211 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 MRPS18AQ9NVS2 196 aaKnown RBP4.6□□□□□ -1.67
CDH13-212ENST00000569144 ABCD2Q9UBJ2 740 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 KCNG2Q9UJ96 466 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 AP3M1Q9Y2T2 418 aa4.6□□□□□ -1.67
CDH13-212ENST00000569144 SIRT4Q9Y6E7 314 aaPredicted RBP4.6□□□□□ -1.67
CDH13-212ENST00000569144 hCG_38984A0A1B0GV85 526 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 SLC1A7O00341 560 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 CXCR6O00574 342 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 SLC25A17O43808 307 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 MTRF1O75570 445 aaKnown RBP4.59□□□□□ -1.67
CDH13-212ENST00000569144 IFNA14P01570 189 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 ZNF728P0DKX0 622 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 SLC2A1P11166 492 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 CD24P25063 80 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 BRS3P32247 399 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 DCTDP32321 178 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 GPR4P46093 362 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 RPS6KA3P51812 740 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 PSME3P61289 254 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 SLC35B1P78383 322 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 DYRK1AQ13627 763 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 KIR2DS1Q14954 304 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 TRAM2Q15035 370 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 TIGD6Q17RP2 521 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 FAM27D1Q5T7N8 215 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 Q6ZNX1 250 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 MBOAT2Q6ZWT7 520 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 VTCN1Q7Z7D3 282 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 ZDHHC21Q8IVQ6 265 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 OFCC1Q8IZS5 231 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 FTMTQ8N4E7 242 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 ZNF561Q8N587 486 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 CSNK2A3Q8NEV1 391 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 OR5P3Q8WZ94 311 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 LZICQ8WZA0 190 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 STMN2Q93045 179 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 RNFT2Q96EX2 444 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 REEP6Q96HR9 211 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 CDRT15Q96T59 188 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 AIFM2Q9BRQ8 373 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 COPS4Q9BT78 406 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 TINAGL1Q9GZM7 467 aaPredicted RBP4.59□□□□□ -1.67
CDH13-212ENST00000569144 C1orf21Q9H246 121 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 DCLRE1BQ9H816 532 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 YY1AP1Q9H869 796 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 ABCB9Q9NP78 766 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 TBC1D23Q9NUY8 699 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 ARL8BQ9NVJ2 186 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 ETAA1Q9NY74 926 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 ARL2BPQ9Y2Y0 163 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 RHBDD3Q9Y3P4 386 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 MPC1Q9Y5U8 109 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 IER3IP1Q9Y5U9 82 aa4.59□□□□□ -1.67
CDH13-212ENST00000569144 A0A087WUU8 490 aa4.58□□□□□ -1.68
CDH13-212ENST00000569144 IGHV2-26A0A0B4J1V2 119 aa4.58□□□□□ -1.68
CDH13-212ENST00000569144 RFPL4AA6NLU0 287 aa4.58□□□□□ -1.68
CDH13-212ENST00000569144 PRR23D1E9PI22 279 aaPredicted RBP4.58□□□□□ -1.68
CDH13-212ENST00000569144 RFPL4AL1F8VTS6 287 aa4.58□□□□□ -1.68
CDH13-212ENST00000569144 M0QYG6 137 aa4.58□□□□□ -1.68
CDH13-212ENST00000569144 NDUFAB1O14561 156 aa4.58□□□□□ -1.68
CDH13-212ENST00000569144 FFAR1O14842 300 aa4.58□□□□□ -1.68
CDH13-212ENST00000569144 DCTN3O75935 186 aa4.58□□□□□ -1.68
CDH13-212ENST00000569144 RENP00797 406 aa4.58□□□□□ -1.68
CDH13-212ENST00000569144 HLA-DQA2P01906 255 aa4.58□□□□□ -1.68
CDH13-212ENST00000569144 PRR23D2P0DMB1 279 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms