RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 SRFP11831 508 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 SULT1A1P50225 295 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 MOB3AQ96BX8 217 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 MSI2Q96DH6 328 aaKnown RBP18.81■□□□□ 0.6
SPSB3-208ENST00000566339 SPACA9Q96E40 222 aaPredicted RBP18.81■□□□□ 0.6
SPSB3-208ENST00000566339 SMIM3Q9BZL3 60 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 ELL3Q9HB65 397 aaPredicted RBP18.81■□□□□ 0.6
SPSB3-208ENST00000566339 CA14Q9ULX7 337 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 LHX6Q9UPM6 363 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 USP34Q70CQ2 3546 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 TP53I11O14683 189 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 DHHO43323 396 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 SCGB1D2O95969 90 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 OR5AC1P0C628 307 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 GABRR1P24046 479 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 ID4P47928 161 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 GNMTQ14749 295 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 FBXW12Q6X9E4 464 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 ZNF100Q8IYN0 542 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 GNRHR2Q96P88 292 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 BCO1Q9HAY6 547 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 ZNF286AQ9HBT8 521 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 WFDC1Q9HC57 220 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 PLSCR2Q9NRY7 297 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 AK3Q9UIJ7 227 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 A0A087WWC5 75 aa18.8■□□□□ 0.6
SPSB3-208ENST00000566339 DUXBA0A1W2PPF3 345 aa18.8■□□□□ 0.6
SPSB3-208ENST00000566339 ZNF850A8MQ14 1090 aa18.8■□□□□ 0.6
SPSB3-208ENST00000566339 NME2P1O60361 137 aa18.8■□□□□ 0.6
SPSB3-208ENST00000566339 MMP9P14780 707 aa18.8■□□□□ 0.6
SPSB3-208ENST00000566339 ANOS1P23352 680 aa18.8■□□□□ 0.6
SPSB3-208ENST00000566339 RSU1Q15404 277 aa18.8■□□□□ 0.6
SPSB3-208ENST00000566339 TMEM176BQ3YBM2 270 aaPredicted RBP18.8■□□□□ 0.6
SPSB3-208ENST00000566339 TMEM156Q8N614 296 aa18.8■□□□□ 0.6
SPSB3-208ENST00000566339 OR10G3Q8NGC4 313 aa18.8■□□□□ 0.6
SPSB3-208ENST00000566339 OR4D5Q8NGN0 318 aa18.8■□□□□ 0.6
SPSB3-208ENST00000566339 THAP3Q8WTV1 239 aaPredicted RBP18.8■□□□□ 0.6
SPSB3-208ENST00000566339 TECTBQ96PL2 329 aa18.8■□□□□ 0.6
SPSB3-208ENST00000566339 SPIN2AQ99865 258 aa18.8■□□□□ 0.6
SPSB3-208ENST00000566339 SPIN2BQ9BPZ2 258 aa18.8■□□□□ 0.6
SPSB3-208ENST00000566339 RSRP1Q9BUV0 290 aa18.8■□□□□ 0.6
SPSB3-208ENST00000566339 SEC16AO15027 2179 aa18.79■□□□□ 0.6
SPSB3-208ENST00000566339 A6NLC8 198 aa18.79■□□□□ 0.6
SPSB3-208ENST00000566339 F5H5K5 113 aa18.79■□□□□ 0.6
SPSB3-208ENST00000566339 PRH1P02810 166 aa18.79■□□□□ 0.6
SPSB3-208ENST00000566339 SFTPDP35247 375 aa18.79■□□□□ 0.6
SPSB3-208ENST00000566339 MTCP1P56278 107 aa18.79■□□□□ 0.6
SPSB3-208ENST00000566339 MRPS34P82930 218 aaKnown RBP18.79■□□□□ 0.6
SPSB3-208ENST00000566339 SRSF7Q16629 238 aaKnown RBP eCLIP18.79■□□□□ 0.6
SPSB3-208ENST00000566339 RSPO1Q2MKA7 263 aaPredicted RBP18.79■□□□□ 0.6
SPSB3-208ENST00000566339 KRBOX4Q5JUW0 171 aa18.79■□□□□ 0.6
SPSB3-208ENST00000566339 FAM27BQ5VT28 67 aa18.79■□□□□ 0.6
SPSB3-208ENST00000566339 LCN10Q6JVE6 187 aa18.79■□□□□ 0.6
SPSB3-208ENST00000566339 SHISA6Q6ZSJ9 500 aa18.79■□□□□ 0.6
SPSB3-208ENST00000566339 YPEL4Q96NS1 127 aa18.79■□□□□ 0.6
SPSB3-208ENST00000566339 C11orf1Q9H5F2 150 aa18.79■□□□□ 0.6
SPSB3-208ENST00000566339 NIT2Q9NQR4 276 aa18.79■□□□□ 0.6
SPSB3-208ENST00000566339 WNT16Q9UBV4 365 aa18.79■□□□□ 0.6
SPSB3-208ENST00000566339 PIGBOS1A0A0B4J2F0 54 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 A0A1W2PPH5 198 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 AFF3P51826 1226 aaKnown RBP18.78■□□□□ 0.6
SPSB3-208ENST00000566339 RAB35Q15286 201 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 FAM69BQ5VUD6 431 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 TMEM211Q6ICI0 200 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 TMEM123Q8N131 208 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 DEFB119Q8N690 84 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 PIGTQ969N2 578 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 IP6K3Q96PC2 410 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 SLC2A9Q9NRM0 540 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 KMT2EQ8IZD2 1858 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 GON4LQ3T8J9 2241 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 LINC00587B1AMM8 73 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 DNPH1O43598 174 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 PITX3O75364 302 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 HIKESHIQ53FT3 197 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 TMEM42Q69YG0 159 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 DPPA3Q6W0C5 159 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 ETV3LQ6ZN32 361 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 WDSUB1Q8N9V3 476 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 NPRL2Q8WTW4 380 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 SGK3Q96BR1 496 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 MESP1Q9BRJ9 268 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 SLC25A31Q9H0C2 315 aa18.78■□□□□ 0.6
SPSB3-208ENST00000566339 MSTNO14793 375 aa18.77■□□□□ 0.6
SPSB3-208ENST00000566339 OR8U8P0C7N1 319 aa18.77■□□□□ 0.6
SPSB3-208ENST00000566339 PNLIPP16233 465 aa18.77■□□□□ 0.6
SPSB3-208ENST00000566339 CRYGSP22914 178 aa18.77■□□□□ 0.6
SPSB3-208ENST00000566339 POLR2GP62487 172 aaKnown RBP eCLIP18.77■□□□□ 0.6
SPSB3-208ENST00000566339 SOHLH1Q5JUK2 328 aa18.77■□□□□ 0.6
SPSB3-208ENST00000566339 Q6ZS49 121 aa18.77■□□□□ 0.6
SPSB3-208ENST00000566339 SLC16A13Q7RTY0 426 aa18.77■□□□□ 0.6
SPSB3-208ENST00000566339 TMEM105Q8N8V8 129 aa18.77■□□□□ 0.6
SPSB3-208ENST00000566339 ZNF565Q8N9K5 539 aa18.77■□□□□ 0.6
SPSB3-208ENST00000566339 SUMF2Q8NBJ7 301 aa18.77■□□□□ 0.6
SPSB3-208ENST00000566339 FOXD3Q9UJU5 478 aaPredicted RBP18.77■□□□□ 0.6
SPSB3-208ENST00000566339 C5orf63A6NC05 138 aa18.76■□□□□ 0.59
SPSB3-208ENST00000566339 CXorf65A6NEN9 183 aa18.76■□□□□ 0.59
SPSB3-208ENST00000566339 HSPA12AO43301 675 aa18.76■□□□□ 0.59
SPSB3-208ENST00000566339 GATCO43716 136 aaKnown RBP18.76■□□□□ 0.59
SPSB3-208ENST00000566339 RAMP1O60894 148 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms