RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 GEMIN2O14893 280 aaKnown RBP25.86■■□□□ 1.73
CTCF-203ENST00000566078 ADH4P08319 380 aa25.86■■□□□ 1.73
CTCF-203ENST00000566078 TRIQKQ629K1 86 aa25.86■■□□□ 1.73
CTCF-203ENST00000566078 FAM58AQ8N1B3 248 aa25.86■■□□□ 1.73
CTCF-203ENST00000566078 SMIM4Q8WVI0 70 aa25.86■■□□□ 1.73
CTCF-203ENST00000566078 RHOFQ9HBH0 211 aa25.86■■□□□ 1.73
CTCF-203ENST00000566078 IL36RNQ9UBH0 155 aa25.86■■□□□ 1.73
CTCF-203ENST00000566078 RAI1Q7Z5J4 1906 aaPredicted RBP25.86■■□□□ 1.73
CTCF-203ENST00000566078 FOXI3A8MTJ6 420 aaPredicted RBP25.85■■□□□ 1.73
CTCF-203ENST00000566078 AKR7A2O43488 359 aa25.85■■□□□ 1.73
CTCF-203ENST00000566078 BLVRBP30043 206 aaPredicted RBP25.85■■□□□ 1.73
CTCF-203ENST00000566078 STEAP3Q658P3 488 aa25.85■■□□□ 1.73
CTCF-203ENST00000566078 MOGAT3Q86VF5 341 aa25.85■■□□□ 1.73
CTCF-203ENST00000566078 LYSMD2Q8IV50 215 aa25.85■■□□□ 1.73
CTCF-203ENST00000566078 POC1AQ8NBT0 407 aa25.85■■□□□ 1.73
CTCF-203ENST00000566078 NRIP2Q9BQI9 281 aa25.85■■□□□ 1.73
CTCF-203ENST00000566078 LRBAP50851 2863 aa25.85■■□□□ 1.73
CTCF-203ENST00000566078 A6NNC1 897 aa25.85■■□□□ 1.73
CTCF-203ENST00000566078 GSTZ1O43708 216 aaPredicted RBP25.85■■□□□ 1.73
CTCF-203ENST00000566078 GNB3P16520 340 aa25.85■■□□□ 1.73
CTCF-203ENST00000566078 TMEM50BP56557 158 aa25.85■■□□□ 1.73
CTCF-203ENST00000566078 GMFBP60983 142 aa25.85■■□□□ 1.73
CTCF-203ENST00000566078 MRPS10P82664 201 aaKnown RBP25.85■■□□□ 1.73
CTCF-203ENST00000566078 ZNF260Q3ZCT1 412 aa25.85■■□□□ 1.73
CTCF-203ENST00000566078 PLAC9Q5JTB6 97 aa25.85■■□□□ 1.73
CTCF-203ENST00000566078 Q6ZTK2 550 aa25.85■■□□□ 1.73
CTCF-203ENST00000566078 ZCCHC24Q8N2G6 241 aaKnown RBP25.85■■□□□ 1.73
CTCF-203ENST00000566078 ARHGAP5-AS1Q96IT6 56 aa25.85■■□□□ 1.73
CTCF-203ENST00000566078 THAP7Q9BT49 309 aaPredicted RBP25.85■■□□□ 1.73
CTCF-203ENST00000566078 FN3KRPQ9HA64 309 aa25.85■■□□□ 1.73
CTCF-203ENST00000566078 A0A1W2PQ09 198 aa25.84■■□□□ 1.73
CTCF-203ENST00000566078 TMEM235A6NFC5 223 aa25.84■■□□□ 1.73
CTCF-203ENST00000566078 GABARAPH6UMI1 98 aa25.84■■□□□ 1.73
CTCF-203ENST00000566078 NXPH2O95156 264 aa25.84■■□□□ 1.73
CTCF-203ENST00000566078 CD55P08174 381 aa25.84■■□□□ 1.73
CTCF-203ENST00000566078 ACAA1P09110 424 aaPredicted RBP25.84■■□□□ 1.73
CTCF-203ENST00000566078 PLA2G2AP14555 144 aa25.84■■□□□ 1.73
CTCF-203ENST00000566078 ERVK11-1P61568 191 aa25.84■■□□□ 1.73
CTCF-203ENST00000566078 SNRPD2P62316 118 aaKnown RBP25.84■■□□□ 1.73
CTCF-203ENST00000566078 SWI5Q1ZZU3 235 aa25.84■■□□□ 1.73
CTCF-203ENST00000566078 CDNFQ49AH0 187 aa25.84■■□□□ 1.73
CTCF-203ENST00000566078 NHLRC3Q5JS37 347 aa25.84■■□□□ 1.73
CTCF-203ENST00000566078 OR52I2Q8NH67 350 aa25.84■■□□□ 1.73
CTCF-203ENST00000566078 YIPF5Q969M3 257 aa25.84■■□□□ 1.73
CTCF-203ENST00000566078 ZNF581Q9P0T4 197 aa25.84■■□□□ 1.73
CTCF-203ENST00000566078 ELF5Q9UKW6 265 aaPredicted RBP25.84■■□□□ 1.73
CTCF-203ENST00000566078 MEIOCA2RUB1 952 aa25.83■■□□□ 1.73
CTCF-203ENST00000566078 NOS1APO75052 506 aaPredicted RBP25.83■■□□□ 1.73
CTCF-203ENST00000566078 CD3GP09693 182 aa25.83■■□□□ 1.73
CTCF-203ENST00000566078 HIST1H1DP16402 221 aaKnown RBP25.83■■□□□ 1.73
CTCF-203ENST00000566078 GATA4P43694 442 aa25.83■■□□□ 1.73
CTCF-203ENST00000566078 NKAPLQ5M9Q1 402 aa25.83■■□□□ 1.73
CTCF-203ENST00000566078 FCAMRQ8WWV6 532 aa25.83■■□□□ 1.73
CTCF-203ENST00000566078 TRIM63Q969Q1 353 aa25.83■■□□□ 1.73
CTCF-203ENST00000566078 HS3ST1O14792 307 aa25.82■■□□□ 1.72
CTCF-203ENST00000566078 TPD52L2O43399 206 aaKnown RBP25.82■■□□□ 1.72
CTCF-203ENST00000566078 LANCL1O43813 399 aa25.82■■□□□ 1.72
CTCF-203ENST00000566078 PRSS3P35030 304 aa25.82■■□□□ 1.72
CTCF-203ENST00000566078 CCL8P80075 99 aa25.82■■□□□ 1.72
CTCF-203ENST00000566078 GUCA2AQ02747 115 aa25.82■■□□□ 1.72
CTCF-203ENST00000566078 LRRC29Q8WV35 223 aa25.82■■□□□ 1.72
CTCF-203ENST00000566078 MS4A5Q9H3V2 200 aa25.82■■□□□ 1.72
CTCF-203ENST00000566078 A0A1W2PPR1 153 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 PDCD1Q15116 288 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 TESK1Q15569 626 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 FAM209AQ5JX71 171 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 SIGIRRQ6IA17 410 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 CYYR1Q96J86 154 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 PECRQ9BY49 303 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 FAM90A10PA6NDY2 464 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 FAM90A18PA6NE21 464 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 FAM90A16PA6NEW6 464 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 FAM90A20PA6NIJ5 464 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 FAM90A8PA6NJQ4 464 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 FAM90A7PA6NKC0 464 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 FAM90A22PA8MWA6 464 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 FAM90A12PA8MX19 464 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 FAM90A5PA8MXJ8 464 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 FAM90A23PA8MXZ1 464 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 MFNGO00587 321 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 OR7C1O76099 320 aaPredicted RBP25.81■■□□□ 1.72
CTCF-203ENST00000566078 GSTP1P09211 210 aaKnown RBP25.81■■□□□ 1.72
CTCF-203ENST00000566078 FAM90A15PP0C7V4 464 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 FAM90A13PP0C7W8 464 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 FAM90A14PP0C7W9 464 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 FAM90A24PP0C7X0 464 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 OLFML2AQ68BL7 652 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 OR10Z1Q8NGY1 313 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 POM121Q96HA1 1249 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 HES4Q9HCC6 221 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 GCM1Q9NP62 436 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 DECR2Q9NUI1 292 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 FAIMQ9NVQ4 179 aa25.81■■□□□ 1.72
CTCF-203ENST00000566078 WNT9BO14905 357 aa25.8■■□□□ 1.72
CTCF-203ENST00000566078 RBMXP38159 391 aaKnown RBP25.8■■□□□ 1.72
CTCF-203ENST00000566078 PMELP40967 661 aa25.8■■□□□ 1.72
CTCF-203ENST00000566078 INPP1P49441 399 aa25.8■■□□□ 1.72
CTCF-203ENST00000566078 HOXA4Q00056 320 aaPredicted RBP25.8■■□□□ 1.72
CTCF-203ENST00000566078 SCN1BQ07699 218 aa25.8■■□□□ 1.72
CTCF-203ENST00000566078 LINC00596Q86U02 117 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms