RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 ARR3P36575 388 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 HTR5AP47898 357 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 TMEM33P57088 247 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 MLF1P58340 268 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 SUPT4H1P63272 117 aaKnown RBP6.66□□□□□ -1.34
ATXN3-249ENST00000564606 PLP2Q04941 152 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 UBE2V2Q15819 145 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 ANKRD55Q3KP44 614 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 TMEM268Q5VZI3 342 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 TMEM42Q69YG0 159 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 BTNL8Q6UX41 500 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 Q6ZRG5 221 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 MOB1BQ7L9L4 216 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 ZNF695Q8IW36 515 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 LINC00518Q8N0U6 118 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 OR2V1Q8NHB1 315 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 LYPD6BQ8NI32 183 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 SAP25Q8TEE9 199 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 NANOS1Q8WY41 292 aaKnown RBP6.66□□□□□ -1.34
ATXN3-249ENST00000564606 SLAMF9Q96A28 289 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 MOB3AQ96BX8 217 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 MARS2Q96GW9 593 aaKnown RBP6.66□□□□□ -1.34
ATXN3-249ENST00000564606 IMMP1LQ96LU5 166 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 IP6K3Q96PC2 410 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 FOXB1Q99853 325 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 KLHDC3Q9BQ90 382 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 STRADBQ9C0K7 418 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 EIF5A2Q9GZV4 153 aaKnown RBP6.66□□□□□ -1.34
ATXN3-249ENST00000564606 SLC35B3Q9H1N7 401 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 WDR13Q9H1Z4 485 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 ARV1Q9H2C2 271 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 ZNF442Q9H7R0 627 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 PLEKHF2Q9H8W4 249 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 RNF122Q9H9V4 155 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 ACKR4Q9NPB9 350 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 OR5AC2Q9NZP5 309 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 STARD10Q9Y365 291 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 UBE2J1Q9Y385 318 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-249ENST00000564606 SIT1Q9Y3P8 196 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 LSM5Q9Y4Y9 91 aaKnown RBP6.66□□□□□ -1.34
ATXN3-249ENST00000564606 ADAMTS9Q9P2N4 1935 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 THADAQ6YHU6 1953 aa6.66□□□□□ -1.34
ATXN3-249ENST00000564606 MPDZO75970 2070 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 RNF212BA8MTL3 300 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 B4DEV8 164 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 TRAPPC2LH3BP13 241 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 GPR31O00270 319 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 SDCBPO00560 298 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-249ENST00000564606 SMAD9O15198 467 aaKnown RBP6.65□□□□□ -1.34
ATXN3-249ENST00000564606 SYNGR3O43761 229 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 LRP3O75074 770 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 SCGB1D2O95969 90 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 IFNA5P01569 189 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 OR8U9P0C7N5 309 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 RPS2P15880 293 aaKnown RBP6.65□□□□□ -1.34
ATXN3-249ENST00000564606 ZNF708P17019 499 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 CRYGSP22914 178 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 PTAFRP25105 342 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 MDH2P40926 338 aaKnown RBP6.65□□□□□ -1.34
ATXN3-249ENST00000564606 NKX2-1P43699 371 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-249ENST00000564606 AKR1D1P51857 326 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 RPL23AP62750 156 aaKnown RBP6.65□□□□□ -1.34
ATXN3-249ENST00000564606 TNP2Q05952 138 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 MRPL49Q13405 166 aaKnown RBP6.65□□□□□ -1.34
ATXN3-249ENST00000564606 TMEM187Q14656 261 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 SSPNQ14714 243 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 HFEQ30201 348 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 DCAF12Q5T6F0 453 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 SAMD5Q5TGI4 173 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 PLCXD3Q63HM9 321 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 RPL7L1Q6DKI1 246 aaKnown RBP6.65□□□□□ -1.34
ATXN3-249ENST00000564606 GUSBP11Q6P575 273 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 FIP1L1Q6UN15 594 aaKnown RBP6.65□□□□□ -1.34
ATXN3-249ENST00000564606 STX12Q86Y82 276 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 LDLRAD3Q86YD5 345 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 Q8IYB0 196 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 OR51F2Q8NH61 342 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 IFI44Q8TCB0 444 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 GLYATL2Q8WU03 294 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 TCTEX1D2Q8WW35 142 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 TOMM40LQ969M1 308 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 SPSB4Q96A44 273 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 NABP1Q96AH0 204 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 SGK3Q96BR1 496 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 OR10C1Q96KK4 312 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 JSRP1Q96MG2 331 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-249ENST00000564606 SPACA5Q96QH8 159 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 RSRP1Q9BUV0 290 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 C1QTNF6Q9BXI9 259 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 SAV1Q9H4B6 383 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-249ENST00000564606 GPR173Q9NS66 373 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 FBXL17Q9UF56 701 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 CACFD1Q9UGQ2 172 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 MCTS1Q9ULC4 181 aaKnown RBP6.65□□□□□ -1.34
ATXN3-249ENST00000564606 ATXN7L1Q9ULK2 861 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-249ENST00000564606 ST3GAL6Q9Y274 331 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 SLCO1B1Q9Y6L6 691 aa6.65□□□□□ -1.34
ATXN3-249ENST00000564606 CENPFP49454 3210 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 C3orf85A0A1B0GTC6 90 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 LOC101059948A0A1B0GTJ6 334 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms