RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 PSMB2P49721 201 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 STX4Q12846 297 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 Q6ZSR6 202 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 ZNF645Q8N7E2 425 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 TTLQ8NG68 377 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 OR4K17Q8NGC6 315 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 OR2L8Q8NGY9 312 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 OR51Q1Q8NH59 317 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 CCDC12Q8WUD4 166 aaPredicted RBP1.58□□□□□ -2.16
CHD9-209ENST00000564255 ESR2Q92731 530 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 NEURL3Q96EH8 262 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 OR10C1Q96KK4 312 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 RNF5Q99942 180 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 KIAA1671Q9BY89 1806 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 NLE1Q9NVX2 485 aaPredicted RBP1.58□□□□□ -2.16
CHD9-209ENST00000564255 CNTLNQ9NXG0 1405 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 EURLQ9NYK6 297 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 ARHGEF12Q9NZN5 1544 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 TRAPPC8Q9Y2L5 1435 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 YTHDF2Q9Y5A9 579 aaKnown RBP1.58□□□□□ -2.16
CHD9-209ENST00000564255 RFNGQ9Y644 331 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 RGS12O14924 1447 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 LRPPRCP42704 1394 aaKnown RBP1.58□□□□□ -2.16
CHD9-209ENST00000564255 TRPC5OSA6NMA1 111 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 OR5F1O95221 314 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 CCNE2O96020 404 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 LINC00869P0C866 280 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 HSPD1P10809 573 aaKnown RBP1.58□□□□□ -2.16
CHD9-209ENST00000564255 NELFEP18615 380 aaKnown RBP1.58□□□□□ -2.16
CHD9-209ENST00000564255 MAGEA6P43360 314 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 TPBGQ13641 420 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 YIF1BQ5BJH7 314 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 TEX30Q5JUR7 227 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 FAM173BQ6P4H8 233 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 TMEM256Q8N2U0 113 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 OR4K2Q8NGD2 314 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 LINC01560Q8TB33 94 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 TMEM159Q96B96 161 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 FOPNLQ96NB1 174 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 METTL26Q96S19 204 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 CHCHD7Q9BUK0 85 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 NUDT9Q9BW91 350 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 BBS2Q9BXC9 721 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 BEX2Q9BXY8 128 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 TMBIM4Q9HC24 238 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 C12orf4Q9NQ89 552 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 ZNF223Q9UK11 482 aaPredicted RBP1.58□□□□□ -2.16
CHD9-209ENST00000564255 FARSAQ9Y285 508 aaKnown RBP1.58□□□□□ -2.16
CHD9-209ENST00000564255 LRRC42Q9Y546 428 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 ORC6Q9Y5N6 252 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 CCDC88BA6NC98 1476 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 FAM135BQ49AJ0 1406 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 NACAE9PAV3 2078 aa1.58□□□□□ -2.16
CHD9-209ENST00000564255 CENPVL3A0A0U1RRI6 287 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 TCAPO15273 167 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 FOXH1O75593 365 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 RPSAP08865 295 aaKnown RBP1.57□□□□□ -2.16
CHD9-209ENST00000564255 ADRA2AP08913 450 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 ME2P23368 584 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 PSMB6P28072 239 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 UBE2KP61086 200 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 CD164Q04900 197 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 PMS2P3Q13401 168 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 BSXQ3C1V8 233 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 C5orf47Q569G3 176 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 PTRHD1Q6GMV3 140 aaKnown RBP1.57□□□□□ -2.16
CHD9-209ENST00000564255 NANOGP8Q6NSW7 305 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 TRMT10CQ7L0Y3 403 aaKnown RBP1.57□□□□□ -2.16
CHD9-209ENST00000564255 SLC25A29Q8N8R3 303 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 SPANXA2-OT1Q8N9U9 137 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 ACBD4Q8NC06 268 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 CDC26Q8NHZ8 85 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 ZNF461Q8TAF7 563 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 SLC25A46Q96AG3 418 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 ZNF285Q96NJ3 590 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 ANGPTL4Q9BY76 406 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 NXF2Q9GZY0 626 aaKnown RBP1.57□□□□□ -2.16
CHD9-209ENST00000564255 SNX24Q9Y343 169 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 PIKFYVEQ9Y2I7 2098 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 ZMYM4Q5VZL5 1548 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 TUBGCP6Q96RT7 1819 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 PRRC2AP48634 2157 aaKnown RBP1.57□□□□□ -2.16
CHD9-209ENST00000564255 IGLV3-16A0A075B6K0 115 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 IGHV3-49A0A0A0MS15 119 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 TMEM213A2RRL7 107 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 GATBO75879 557 aaKnown RBP1.57□□□□□ -2.16
CHD9-209ENST00000564255 CCNKO75909 580 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 CDK14O94921 469 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 GIMD1P0DJR0 217 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 EVI2BP34910 448 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 RAB38P57729 211 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 OR10A3P58181 314 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 C1QTNF8P60827 252 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 PPP1CAP62136 330 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 LAMTOR4Q0VGL1 99 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 CLEC12AQ5QGZ9 265 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 RBM48Q5RL73 367 aaKnown RBP1.57□□□□□ -2.16
CHD9-209ENST00000564255 FAM222AQ5U5X8 452 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 ZFP1Q6P2D0 407 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 CLEC19AQ6UXS0 136 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms