RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 RHBDL1O75783 438 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 IGKV1D-12P01611 117 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 IGHV4-39P01824 125 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 HPXP02790 462 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 PGA5P0DJD9 388 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 GTF2F2P13984 249 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 BCL3P20749 454 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 SERPINA2P20848 420 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 CLEC12BQ2HXU8 276 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 HFEQ30201 348 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 FIP1L1Q6UN15 594 aaKnown RBP14.28□□□□□ -0.12
CMTM3-208ENST00000564247 CIARTQ8N365 385 aaPredicted RBP14.28□□□□□ -0.12
CMTM3-208ENST00000564247 SAMD12Q8N8I0 201 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 POC1AQ8NBT0 407 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 OR10K1Q8NGX5 313 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 LGALS14Q8TCE9 139 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 RDH5Q92781 318 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 PTX4Q96A99 478 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 MRPS24Q96EL2 167 aaKnown RBP14.28□□□□□ -0.12
CMTM3-208ENST00000564247 CMTM3Q96MX0 182 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 URM1Q9BTM9 101 aaKnown RBP14.28□□□□□ -0.12
CMTM3-208ENST00000564247 BARX1Q9HBU1 254 aaPredicted RBP14.28□□□□□ -0.12
CMTM3-208ENST00000564247 RASL12Q9NYN1 266 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 FBLN5Q9UBX5 448 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 ADAM30Q9UKF2 790 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 PEX16Q9Y5Y5 336 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 TMEM272A0A1B0GTI8 110 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 METTL21EPA6NDL7 271 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 AKR7A2O43488 359 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 NDUFS7O75251 213 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 CLPXO76031 633 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 NXPH2O95156 264 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 MPIG6BO95866 241 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 F12P00748 615 aaPredicted RBP14.27□□□□□ -0.13
CMTM3-208ENST00000564247 VSIG8P0DPA2 414 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 RAB6AP20340 208 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 GLRA1P23415 457 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 PMELP40967 661 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 NPBWR2P48146 333 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 ZNF181Q2M3W8 571 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 ELP2Q6IA86 826 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 FAM58AQ8N1B3 248 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 OSR2Q8N2R0 312 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 BOLLQ8N9W6 283 aaKnown RBP14.27□□□□□ -0.13
CMTM3-208ENST00000564247 OR5H6Q8NGV6 325 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 CCL17Q92583 94 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 EMG1Q92979 244 aaKnown RBP14.27□□□□□ -0.13
CMTM3-208ENST00000564247 PHF21AQ96BD5 680 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 ZNF488Q96MN9 340 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 TREM2Q9NZC2 230 aa14.27□□□□□ -0.13
CMTM3-208ENST00000564247 TMEM14DPA8MWL7 114 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 CTDSP2O14595 271 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 LDLRAD4O15165 306 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 SFTPBP07988 381 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 DAOP14920 347 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 MGMTP16455 207 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 EFNA4P52798 201 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 MRPS11P82912 194 aaKnown RBP14.26□□□□□ -0.13
CMTM3-208ENST00000564247 QRFPP83859 136 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 UBE2NLQ5JXB2 153 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 OR10K2Q6IF99 312 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 DNM1P46Q6ZS02 220 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 Q8NFD4 153 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 OR51T1Q8NGJ9 327 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 FAM46BQ96A09 425 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 S100A16Q96FQ6 103 aaKnown RBP14.26□□□□□ -0.13
CMTM3-208ENST00000564247 C1orf147Q96MC9 270 aaPredicted RBP14.26□□□□□ -0.13
CMTM3-208ENST00000564247 SMR3AQ99954 134 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 NRIP2Q9BQI9 281 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 TMEM59Q9BXS4 323 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 SELENOIQ9C0D9 397 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 BANF2Q9H503 90 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 TMEM106BQ9NUM4 274 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 GLS2Q9UI32 602 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 NPTNQ9Y639 398 aa14.26□□□□□ -0.13
CMTM3-208ENST00000564247 FAM25AB3EWG3 89 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 FAM25CB3EWG5 89 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 FAM25GB3EWG6 89 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 H3BUI4 141 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 HPGDSO60760 199 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 LHBP01229 141 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 PRKACAP17612 351 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 GMFBP60983 142 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 FGF12P61328 243 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 ERVK11-1P61568 191 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 SMIM21Q3B7S5 101 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 BATF2Q8N1L9 274 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 RAB40AQ8WXH6 277 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 POM121Q96HA1 1249 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 ATG5Q9H1Y0 275 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 KCNK15Q9H427 330 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 HMG20AQ9NP66 347 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 RBFOX1Q9NWB1 397 aaKnown RBP14.25□□□□□ -0.13
CMTM3-208ENST00000564247 RHBDL2Q9NX52 303 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 DNAJB11Q9UBS4 358 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 ST3GAL6Q9Y274 331 aa14.25□□□□□ -0.13
CMTM3-208ENST00000564247 NSD1Q96L73 2696 aaPredicted RBP14.25□□□□□ -0.13
CMTM3-208ENST00000564247 SRRM5B3KS81 715 aa14.24□□□□□ -0.13
CMTM3-208ENST00000564247 TMEM178BH3BS89 294 aa14.24□□□□□ -0.13
CMTM3-208ENST00000564247 SMAD7O15105 426 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms