RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 CYB5AP00167 134 aa25.23■■□□□ 1.63
CMTM4-204ENST00000563952 ETV1P50549 477 aa25.23■■□□□ 1.63
CMTM4-204ENST00000563952 GTF2A1P52655 376 aaPredicted RBP25.23■■□□□ 1.63
CMTM4-204ENST00000563952 OGFRL1Q5TC84 451 aaPredicted RBP25.23■■□□□ 1.63
CMTM4-204ENST00000563952 LHFPL2Q6ZUX7 228 aa25.23■■□□□ 1.63
CMTM4-204ENST00000563952 MKXQ8IYA7 352 aa25.23■■□□□ 1.63
CMTM4-204ENST00000563952 PIP4P2Q8N4L2 257 aa25.23■■□□□ 1.63
CMTM4-204ENST00000563952 OR4M1Q8NGD0 313 aa25.23■■□□□ 1.63
CMTM4-204ENST00000563952 EMG1Q92979 244 aaKnown RBP25.23■■□□□ 1.63
CMTM4-204ENST00000563952 RFT1Q96AA3 541 aa25.23■■□□□ 1.63
CMTM4-204ENST00000563952 SPSB1Q96BD6 273 aa25.23■■□□□ 1.63
CMTM4-204ENST00000563952 TRBV2A0A0J9YWF9 115 aa25.22■■□□□ 1.63
CMTM4-204ENST00000563952 IRGMA1A4Y4 181 aa25.22■■□□□ 1.63
CMTM4-204ENST00000563952 H0YAE9 185 aa25.22■■□□□ 1.63
CMTM4-204ENST00000563952 HKR1P10072 659 aa25.22■■□□□ 1.63
CMTM4-204ENST00000563952 DCKP27707 260 aa25.22■■□□□ 1.63
CMTM4-204ENST00000563952 RPL31P62899 125 aaKnown RBP25.22■■□□□ 1.63
CMTM4-204ENST00000563952 GUCA2AQ02747 115 aa25.22■■□□□ 1.63
CMTM4-204ENST00000563952 COL10A1Q03692 680 aa25.22■■□□□ 1.63
CMTM4-204ENST00000563952 METAP1DQ6UB28 335 aaPredicted RBP25.22■■□□□ 1.63
CMTM4-204ENST00000563952 C1orf122Q6ZSJ8 110 aa25.22■■□□□ 1.63
CMTM4-204ENST00000563952 ASCC1Q8N9N2 400 aaKnown RBP25.22■■□□□ 1.63
CMTM4-204ENST00000563952 TSEN15Q8WW01 171 aaKnown RBP25.22■■□□□ 1.63
CMTM4-204ENST00000563952 SPACA5Q96QH8 159 aa25.22■■□□□ 1.63
CMTM4-204ENST00000563952 METTL8Q9H825 291 aaKnown RBP25.22■■□□□ 1.63
CMTM4-204ENST00000563952 SPRY1O43609 319 aaPredicted RBP25.21■■□□□ 1.63
CMTM4-204ENST00000563952 TK1P04183 234 aa25.21■■□□□ 1.63
CMTM4-204ENST00000563952 MELTFP08582 738 aa25.21■■□□□ 1.63
CMTM4-204ENST00000563952 EEF1B2P24534 225 aaKnown RBP25.21■■□□□ 1.63
CMTM4-204ENST00000563952 C3orf56Q8N813 242 aa25.21■■□□□ 1.63
CMTM4-204ENST00000563952 HAVCR2Q8TDQ0 301 aa25.21■■□□□ 1.63
CMTM4-204ENST00000563952 ZCCHC4Q9H5U6 513 aa25.21■■□□□ 1.63
CMTM4-204ENST00000563952 RBFOX1Q9NWB1 397 aaKnown RBP25.21■■□□□ 1.63
CMTM4-204ENST00000563952 DHDHQ9UQ10 334 aa25.21■■□□□ 1.63
CMTM4-204ENST00000563952 CASQ2O14958 399 aaPredicted RBP25.2■■□□□ 1.62
CMTM4-204ENST00000563952 RPSAP08865 295 aaKnown RBP25.2■■□□□ 1.62
CMTM4-204ENST00000563952 BCL3P20749 454 aa25.2■■□□□ 1.62
CMTM4-204ENST00000563952 CFPP27918 469 aa25.2■■□□□ 1.62
CMTM4-204ENST00000563952 CAPGP40121 348 aa25.2■■□□□ 1.62
CMTM4-204ENST00000563952 NPBWR2P48146 333 aa25.2■■□□□ 1.62
CMTM4-204ENST00000563952 IL18R1Q13478 541 aa25.2■■□□□ 1.62
CMTM4-204ENST00000563952 AWAT1Q58HT5 328 aa25.2■■□□□ 1.62
CMTM4-204ENST00000563952 OR2G6Q5TZ20 316 aa25.2■■□□□ 1.62
CMTM4-204ENST00000563952 C16orf87Q6PH81 154 aa25.2■■□□□ 1.62
CMTM4-204ENST00000563952 TMPRSS11AQ6ZMR5 421 aa25.2■■□□□ 1.62
CMTM4-204ENST00000563952 Q8IYB0 196 aa25.2■■□□□ 1.62
CMTM4-204ENST00000563952 TNFRSF14Q92956 283 aa25.2■■□□□ 1.62
CMTM4-204ENST00000563952 FAM234AQ9H0X4 552 aa25.2■■□□□ 1.62
CMTM4-204ENST00000563952 CAB39Q9Y376 341 aaPredicted RBP25.2■■□□□ 1.62
CMTM4-204ENST00000563952 FAM96BQ9Y3D0 163 aa25.2■■□□□ 1.62
CMTM4-204ENST00000563952 CHRM2P08172 466 aa25.19■■□□□ 1.62
CMTM4-204ENST00000563952 CALCBP10092 127 aa25.19■■□□□ 1.62
CMTM4-204ENST00000563952 MYL12AP19105 171 aa25.19■■□□□ 1.62
CMTM4-204ENST00000563952 PDZK1IP1Q13113 114 aa25.19■■□□□ 1.62
CMTM4-204ENST00000563952 NCR3LG1Q68D85 454 aa25.19■■□□□ 1.62
CMTM4-204ENST00000563952 TMEM200BQ69YZ2 307 aa25.19■■□□□ 1.62
CMTM4-204ENST00000563952 PNKDQ8N490 385 aa25.19■■□□□ 1.62
CMTM4-204ENST00000563952 TAF15Q92804 592 aaKnown RBP eCLIP25.19■■□□□ 1.62
CMTM4-204ENST00000563952 IL36RNQ9UBH0 155 aa25.19■■□□□ 1.62
CMTM4-204ENST00000563952 DIMT1Q9UNQ2 313 aaKnown RBP25.19■■□□□ 1.62
CMTM4-204ENST00000563952 K7N7A8 449 aa25.18■■□□□ 1.62
CMTM4-204ENST00000563952 NPFFO15130 113 aa25.18■■□□□ 1.62
CMTM4-204ENST00000563952 ANGPTL7O43827 346 aa25.18■■□□□ 1.62
CMTM4-204ENST00000563952 GNAO1P09471 354 aa25.18■■□□□ 1.62
CMTM4-204ENST00000563952 PIPP12273 146 aaPredicted RBP25.18■■□□□ 1.62
CMTM4-204ENST00000563952 SNU13P55769 128 aaKnown RBP25.18■■□□□ 1.62
CMTM4-204ENST00000563952 FOXL1Q12952 345 aa25.18■■□□□ 1.62
CMTM4-204ENST00000563952 XAF1Q6GPH4 301 aa25.18■■□□□ 1.62
CMTM4-204ENST00000563952 FIP1L1Q6UN15 594 aaKnown RBP25.18■■□□□ 1.62
CMTM4-204ENST00000563952 RNF144BQ7Z419 303 aa25.18■■□□□ 1.62
CMTM4-204ENST00000563952 C8orf59Q8N0T1 100 aaPredicted RBP25.18■■□□□ 1.62
CMTM4-204ENST00000563952 FAM58AQ8N1B3 248 aa25.18■■□□□ 1.62
CMTM4-204ENST00000563952 OR5D18Q8NGL1 313 aa25.18■■□□□ 1.62
CMTM4-204ENST00000563952 NEK6Q9HC98 313 aa25.18■■□□□ 1.62
CMTM4-204ENST00000563952 EXOSC1Q9Y3B2 195 aaKnown RBP25.18■■□□□ 1.62
CMTM4-204ENST00000563952 A0A1W2PPH5 198 aa25.17■■□□□ 1.62
CMTM4-204ENST00000563952 MT-ND2P03891 347 aa25.17■■□□□ 1.62
CMTM4-204ENST00000563952 HCKP08631 526 aa25.17■■□□□ 1.62
CMTM4-204ENST00000563952 PRKACAP17612 351 aa25.17■■□□□ 1.62
CMTM4-204ENST00000563952 RPL22L1Q6P5R6 122 aaKnown RBP25.17■■□□□ 1.62
CMTM4-204ENST00000563952 SERPINA12Q8IW75 414 aa25.17■■□□□ 1.62
CMTM4-204ENST00000563952 OR5D14Q8NGL3 314 aa25.17■■□□□ 1.62
CMTM4-204ENST00000563952 OR5D13Q8NGL4 314 aa25.17■■□□□ 1.62
CMTM4-204ENST00000563952 SSMEM1Q8WWF3 244 aa25.17■■□□□ 1.62
CMTM4-204ENST00000563952 TMEM80Q96HE8 168 aa25.17■■□□□ 1.62
CMTM4-204ENST00000563952 VCXQ9H320 206 aa25.17■■□□□ 1.62
CMTM4-204ENST00000563952 UNKLQ9H9P5 680 aaKnown RBP25.17■■□□□ 1.62
CMTM4-204ENST00000563952 CLEC2DQ9UHP7 191 aa25.17■■□□□ 1.62
CMTM4-204ENST00000563952 HSPE1-MOB4S4R3N1 261 aa25.17■■□□□ 1.62
CMTM4-204ENST00000563952 ANK2Q01484 3957 aa25.16■■□□□ 1.62
CMTM4-204ENST00000563952 HAND1O96004 215 aa25.16■■□□□ 1.62
CMTM4-204ENST00000563952 DUSP1P28562 367 aa25.16■■□□□ 1.62
CMTM4-204ENST00000563952 SOX2P48431 317 aa25.16■■□□□ 1.62
CMTM4-204ENST00000563952 PARP16Q8N5Y8 322 aa25.16■■□□□ 1.62
CMTM4-204ENST00000563952 CHIAQ9BZP6 476 aa25.16■■□□□ 1.62
CMTM4-204ENST00000563952 DCLRE1BQ9H816 532 aa25.16■■□□□ 1.62
CMTM4-204ENST00000563952 CHCHD3Q9NX63 227 aaKnown RBP25.16■■□□□ 1.62
CMTM4-204ENST00000563952 TENM1Q9UKZ4 2725 aa25.15■■□□□ 1.62
CMTM4-204ENST00000563952 SULT1B1O43704 296 aa25.15■■□□□ 1.62
CMTM4-204ENST00000563952 ZNF737O75373 536 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms